RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, human

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-206	ENST00000484388	FHL3	Q13643	280 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	CLCA4	Q14CN2	919 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	R3HDM1	Q15032	1099 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	GEN1	Q17RS7	908 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	TRIM60	Q495X7	471 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	PREPL	Q4J6C6	727 aa	Predicted RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	FBXO47	Q5MNV8	452 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	RBM20	Q5T481	1227 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	ARHGAP40	Q5TG30	622 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	ABLIM2	Q6H8Q1	611 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	LIN54	Q6MZP7	749 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	CCDC70	Q6NSX1	233 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	MMS22L	Q6ZRQ5	1243 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	DTX2	Q86UW9	622 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	RASGRP3	Q8IV61	690 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	ABRA	Q8N0Z2	381 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	CPEB3	Q8NE35	698 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	IL17RE	Q8NFR9	667 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	CXorf38	Q8TB03	319 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	DNAJB14	Q8TBM8	379 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	ABHD5	Q8WTS1	349 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	TMEM125	Q96AQ2	219 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	SDCCAG3	Q96C92	435 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	MYEOV	Q96EZ4	313 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	ADAM2	Q99965	735 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	KLC2	Q9H0B6	622 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	PABPC3	Q9H361	631 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	UNKL	Q9H9P5	680 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	GBA2	Q9HCG7	927 aa	Predicted RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	SAYSD1	Q9NPB0	183 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	TRIM36	Q9NQ86	728 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	PRDM8	Q9NQV8	689 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	ITM2C	Q9NQX7	267 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	PARPBP	Q9NWS1	579 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	C9orf78	Q9NZ63	289 aa	Predicted RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	CEP72	Q9P209	647 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	PDP2	Q9P2J9	529 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	SRP68	Q9UHB9	627 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	SCAF8	Q9UPN6	1271 aa	Known RBP	2.58	□□□□□ -2
ABCA4-206	ENST00000484388	HS3ST4	Q9Y661	456 aa		2.58	□□□□□ -2
ABCA4-206	ENST00000484388	TRGV11	A0A075B6L2	103 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388		A0A0G2JLL6	359 aa	Predicted RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388		A0A1B0GVC2	190 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ZAR1L	A6NP61	321 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ADM5	C9JUS6	153 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	FCHO1	O14526	889 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	PLSCR1	O15162	318 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	NCAM2	O15394	837 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	PROM1	O43490	865 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	WDHD1	O75717	1129 aa	Predicted RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	NCR1	O76036	304 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ACTL6B	O94805	426 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	NDUFA10	O95299	355 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	SRGAP2B	P0DMP2	458 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	CD53	P19397	219 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	DDX6	P26196	483 aa	Known RBP eCLIP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ZFP36	P26651	326 aa	Known RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	RBL1	P28749	1068 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ZEB1	P37275	1124 aa	Predicted RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	GATM	P50440	423 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ATXN1	P54253	815 aa	Known RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	PNLIPRP1	P54315	467 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	NXPH1	P58417	271 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	TIRAP	P58753	221 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	AP2B1	P63010	937 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ADAM17	P78536	824 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ITIH3	Q06033	890 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	SCAP	Q12770	1279 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	GPS1	Q13098	491 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	NFIX	Q14938	502 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	RALBP1	Q15311	655 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ATPAF1	Q5TC12	328 aa	Predicted RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	VPS53	Q5VIR6	699 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ERICH6B	Q5W0A0	696 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	SULT6B1	Q6IMI4	303 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ZNF585A	Q6P3V2	769 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	LVRN	Q6Q4G3	990 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	KLHL17	Q6TDP4	642 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	RINL	Q6ZS11	566 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	TTLL10	Q6ZVT0	673 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	MOGAT3	Q86VF5	341 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	SLC44A2	Q8IWA5	706 aa	Predicted RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	SUGP1	Q8IWZ8	645 aa	Known RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	IZUMO1	Q8IYV9	350 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	NRSN1	Q8IZ57	195 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	LNX2	Q8N448	690 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	CHST13	Q8NET6	341 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	SUN3	Q8TAQ9	357 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	OSCP1	Q8WVF1	389 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	WDR60	Q8WVS4	1066 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ATG4A	Q8WYN0	398 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	LENG9	Q96B70	501 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	GRAMD1A	Q96CP6	724 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	RSPRY1	Q96DX4	576 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	RNF31	Q96EP0	1072 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	UBXN10	Q96LJ8	280 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	ZSCAN31	Q96LW9	406 aa	Predicted RBP	2.57	□□□□□ -2
ABCA4-206	ENST00000484388	HIST1H2AA	Q96QV6	131 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	WDR24	Q96S15	920 aa		2.57	□□□□□ -2
ABCA4-206	ENST00000484388	CDK5RAP1	Q96SZ6	601 aa	Known RBP	2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms