RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 ZSCAN32Q9NX65 697 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 DLGAP2Q9P1A6 1054 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 HMGXB4Q9UGU5 601 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
SORT1-204ENST00000482236 SLC8A2Q9UPR5 921 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 CTNND2Q9UQB3 1225 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 PCDHA5Q9Y5H7 936 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 CPQQ9Y646 472 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 COL4A3Q01955 1670 aa11.9□□□□□ -0.5
SORT1-204ENST00000482236 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.51
SORT1-204ENST00000482236 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
SORT1-204ENST00000482236 SCAMP3O14828 347 aaKnown RBP11.89□□□□□ -0.51
SORT1-204ENST00000482236 ATG13O75143 517 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 PFKLP17858 780 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 CLDN10P78369 228 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 PPP3CAQ08209 521 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 USP4Q13107 963 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 ZNF528Q3MIS6 628 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 HECTD3Q5T447 861 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 CEP68Q76N32 757 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 LIMS2Q7Z4I7 341 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 CLDN23Q96B33 292 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
SORT1-204ENST00000482236 KCNK16Q96T55 309 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 P2RY13Q9BPV8 354 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 SDCBP2Q9H190 292 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 TLR8Q9NR97 1041 aaKnown RBP11.89□□□□□ -0.51
SORT1-204ENST00000482236 GMIPQ9P107 970 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 CFAP97Q9P2B7 532 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 GMEB2Q9UKD1 530 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 ARHGAP26Q9UNA1 814 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 PCDHGA2Q9Y5H1 932 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 PIEZO1Q92508 2521 aa11.89□□□□□ -0.51
SORT1-204ENST00000482236 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 PROB1E7EW31 1015 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 LEFTY2O00292 366 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 ARNTLO00327 626 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 ADH1CP00326 375 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 CD19P15391 556 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 CACNA2D1P54289 1103 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 MLLT6P55198 1093 aaPredicted RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 LRMPQ12912 555 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 ZNF77Q15935 545 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 TPD52L1Q16890 204 aaPredicted RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 TXNDC11Q6PKC3 985 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 Q6ZS52 159 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 TADA2BQ86TJ2 420 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 TTC30AQ86WT1 665 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 SPEM1Q8N4L4 309 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 CCDC26Q8TAB7 109 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 TMEM174Q8WUU8 243 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 NELFBQ8WX92 580 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 OVCA2Q8WZ82 227 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 CYFIP2Q96F07 1278 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 LRRC3BQ96PB8 259 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 SLC22A12Q96S37 553 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 FAM126AQ9BYI3 521 aaPredicted RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 ECT2Q9H8V3 914 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 METTL14Q9HCE5 456 aaKnown RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 CHMP5Q9NZZ3 219 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 HESX1Q9UBX0 185 aa11.88□□□□□ -0.51
SORT1-204ENST00000482236 LSM7Q9UK45 103 aaKnown RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 NUP210Q8TEM1 1887 aaPredicted RBP11.88□□□□□ -0.51
SORT1-204ENST00000482236 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 CHRNB1P11230 501 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 ACO1P21399 889 aaKnown RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 DRD1P21728 446 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 SEC13P55735 322 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 SATB1Q01826 763 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 ENPEPQ07075 957 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 ZCWPW2Q504Y3 356 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 C12orf29Q8N999 325 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 CD101Q93033 1021 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 TTLL2Q9BWV7 592 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 APOBEC3GQ9HC16 384 aaKnown RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 PRMT8Q9NR22 394 aaPredicted RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 NAGPAQ9UK23 515 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 MAN1B1Q9UKM7 699 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 SMG5Q9UPR3 1016 aaKnown RBP11.87□□□□□ -0.51
SORT1-204ENST00000482236 NME7Q9Y5B8 376 aa11.87□□□□□ -0.51
SORT1-204ENST00000482236 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
SORT1-204ENST00000482236 RNF40O75150 1001 aa11.86□□□□□ -0.51
SORT1-204ENST00000482236 CILPO75339 1184 aa11.86□□□□□ -0.51
SORT1-204ENST00000482236 CCDC192P0DO97 292 aa11.86□□□□□ -0.51
SORT1-204ENST00000482236 RALAP11233 206 aa11.86□□□□□ -0.51
SORT1-204ENST00000482236 TBXAS1P24557 533 aaPredicted RBP11.86□□□□□ -0.51
SORT1-204ENST00000482236 STX17P56962 302 aa11.86□□□□□ -0.51
SORT1-204ENST00000482236 INCA1Q0VD86 236 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms