RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 TMX3Q96JJ7 454 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 BCCIPQ9P287 314 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX39B-220ENST00000482195 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 EBF1Q9UH73 591 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 ITGA11Q9UKX5 1188 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
DDX39B-220ENST00000482195 PLXND1Q9Y4D7 1925 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 PATE3B3GLJ2 98 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 SCAMP3O14828 347 aaKnown RBP11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ALDH1A2O94788 518 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 CLSTN1O94985 981 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ABL1P00519 1130 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 IDEP14735 1019 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 HDCP19113 662 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 BCKDHBP21953 392 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 GRIK1P39086 918 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 TXLNAP40222 546 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 LHX1P48742 406 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 PDE6CP51160 858 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 CYP27A1Q02318 531 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 KDSRQ06136 332 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 KCNA1Q09470 495 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 IFRD2Q12894 506 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-220ENST00000482195 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
DDX39B-220ENST00000482195 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
DDX39B-220ENST00000482195 KIAA1211LQ6NV74 962 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 RETREG3Q86VR2 466 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 TOP6BLQ8N6T0 577 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 USP33Q8TEY7 942 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 LINC00597Q9H2U6 94 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ST6GALNAC4Q9H4F1 302 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 PCIF1Q9H4Z3 704 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 PDE11AQ9HCR9 933 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 TRPM5Q9NZQ8 1165 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 MAGEC2Q9UBF1 373 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ZMIZ1Q9ULJ6 1067 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ASPMQ8IZT6 3477 aa11.03□□□□□ -0.64
DDX39B-220ENST00000482195 ATXN2Q99700 1313 aaKnown RBP11.03□□□□□ -0.64
DDX39B-220ENST00000482195 CACNA1EQ15878 2313 aa11.02□□□□□ -0.64
DDX39B-220ENST00000482195 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-220ENST00000482195 LEFTY2O00292 366 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 KLF8O95600 359 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-220ENST00000482195 LDHAP00338 332 aaKnown RBP11.02□□□□□ -0.65
DDX39B-220ENST00000482195 TNNC2P02585 160 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 GAP43P17677 238 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 BDNFP23560 247 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 OPRD1P41143 372 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 MAPK8P45983 427 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 RBP5P82980 135 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 POU5F1Q01860 360 aaKnown RBP11.02□□□□□ -0.65
DDX39B-220ENST00000482195 VAC14Q08AM6 782 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 RESTQ13127 1097 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 RRAGBQ5VZM2 374 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 FILIP1Q7Z7B0 1213 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 DEFB124Q8NES8 71 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 MDGA1Q8NFP4 955 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 FUBP3Q96I24 572 aaKnown RBP eCLIP11.02□□□□□ -0.65
DDX39B-220ENST00000482195 EPSTI1Q96J88 318 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 CNOT6LQ96LI5 555 aaKnown RBP11.02□□□□□ -0.65
DDX39B-220ENST00000482195 MYRFLQ96LU7 910 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 PKMYT1Q99640 499 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 SMPD4Q9NXE4 827 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 GCNT4Q9P109 453 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 SEL1LQ9UBV2 794 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 MMP17Q9ULZ9 603 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 ARHGAP26Q9UNA1 814 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 ATRXP46100 2492 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 ZFYVE26Q68DK2 2539 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 BAHCC1Q9P281 2608 aa11.02□□□□□ -0.65
DDX39B-220ENST00000482195 ANTXRLA6NF34 631 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 MYMKA6NI61 221 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 K7EQS6 105 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 ATP2C2O75185 946 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 TOP3BO95985 862 aaKnown RBP11.01□□□□□ -0.65
DDX39B-220ENST00000482195 APODP05090 189 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 CYP17A1P05093 508 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 GARTP22102 1010 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 MAGEA11P43364 429 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 CASP5P51878 434 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 NR6A1Q15406 480 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 SOWAHAQ2M3V2 549 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 TRIM61Q5EBN2 209 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 SCARA3Q6AZY7 606 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 DESI1Q6ICB0 168 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 DENND5BQ6ZUT9 1274 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 USP49Q70CQ1 688 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms