RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 KREMEN2Q8NCW0 462 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 AGAP3Q96P47 875 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 KCNK16Q96T55 309 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 CHP1Q99653 195 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 CRISPLD1Q9H336 500 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 IGFLR1Q9H665 355 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 HSFX1Q9UBD0 423 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 PRRC2BQ5JSZ5 2229 aaKnown RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 PLXNA3P51805 1871 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 PTPRDP23468 1912 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 SOAT2O75908 522 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 C1RP00736 705 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 HAPLN1P10915 354 aaPredicted RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 NPR3P17342 541 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 MAGEA11P43364 429 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 BCAT1P54687 386 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 CDK17Q00537 523 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 TCEAL5Q5H9L2 206 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 DENND1BQ6P3S1 775 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 CLEC20AQ6ZU45 233 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 TCEAL8Q8IYN2 117 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 SLC22A17Q8WUG5 538 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 SMOQ99835 787 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 LHX5Q9H2C1 402 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 TMEM30AQ9NV96 361 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 ADAMTS1Q9UHI8 967 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 FBXW11Q9UKB1 542 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 HCFC2Q9Y5Z7 792 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 MTCL1Q9Y4B5 1905 aaKnown RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 F8VP50 259 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 EPCAMP16422 314 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 POU3F3P20264 500 aaPredicted RBP12.22□□□□□ -0.45
HPS4-212ENST00000481910 ANXA13P27216 316 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 EIF4A3P38919 411 aaKnown RBP12.22□□□□□ -0.45
HPS4-212ENST00000481910 GPD2P43304 727 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 CACNA2D1P54289 1103 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
HPS4-212ENST00000481910 DDR2Q16832 855 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 CYP26C1Q6V0L0 522 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 DEFB123Q8N688 67 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 TMEM35BQ8NCS4 154 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 SLC7A14Q8TBB6 771 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 CCDC42Q96M95 316 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 BAG1Q99933 345 aaPredicted RBP12.22□□□□□ -0.45
HPS4-212ENST00000481910 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 PLEKHA4Q9H4M7 779 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 NHEJ1Q9H9Q4 299 aaPredicted RBP12.22□□□□□ -0.45
HPS4-212ENST00000481910 CSNK1G1Q9HCP0 422 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 DPP7Q9UHL4 492 aa12.22□□□□□ -0.45
HPS4-212ENST00000481910 SSU72P8A0A1W2PR75 194 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 FAM170AA1A519 330 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 C8AP07357 584 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 ALDH1A3P47895 512 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 GPR15P49685 360 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 RPL10AP62906 217 aaKnown RBP12.21□□□□□ -0.45
HPS4-212ENST00000481910 LIN9Q5TKA1 542 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 SDHAF4Q5VUM1 108 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 TRIM72Q6ZMU5 477 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 TMTC1Q8IUR5 882 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 SUGP1Q8IWZ8 645 aaKnown RBP12.21□□□□□ -0.45
HPS4-212ENST00000481910 ZMIZ2Q8NF64 920 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 SLC35F5Q8WV83 523 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 CPA5Q8WXQ8 436 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 PCDHB18PQ96TA0 734 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 ARPC5LQ9BPX5 153 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 INSL5Q9Y5Q6 135 aa12.21□□□□□ -0.45
HPS4-212ENST00000481910 DDX3XO00571 662 aaKnown RBP eCLIP12.21□□□□□ -0.46
HPS4-212ENST00000481910 XPO1O14980 1071 aaKnown RBP12.21□□□□□ -0.46
HPS4-212ENST00000481910 AKR1B10O60218 316 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 LSM8O95777 96 aaKnown RBP12.21□□□□□ -0.46
HPS4-212ENST00000481910 CYP1A1P04798 512 aaPredicted RBP12.21□□□□□ -0.46
HPS4-212ENST00000481910 TWF1Q12792 350 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 HYAL1Q12794 435 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 NAA35Q5VZE5 725 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 PMF1Q6P1K2 205 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 ELMSAN1Q6PJG2 1045 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 PIGZQ86VD9 579 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 MICALL1Q8N3F8 863 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 WDTC1Q8N5D0 677 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.46
HPS4-212ENST00000481910 SLC30A5Q8TAD4 765 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 GPR152Q8TDT2 470 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 C8orf48Q96LL4 319 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 CDX2Q99626 313 aaPredicted RBP12.21□□□□□ -0.46
HPS4-212ENST00000481910 ST7Q9NRC1 585 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 YIPF1Q9Y548 306 aa12.21□□□□□ -0.46
HPS4-212ENST00000481910 CDH23Q9H251 3354 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 A0A087X0T9 212 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 LRG1P02750 347 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 FAM228BP0C875 321 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms