RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 OSR1Q8TAX0 266 aaPredicted RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 SLC13A1Q9BZW2 595 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 TRMT13Q9NUP7 481 aaKnown RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 TYW1Q9NV66 732 aaKnown RBP3.16□□□□□ -1.9
KDM1A-204ENST00000481879 ASIC5Q9NY37 505 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 SQORQ9Y6N5 450 aa3.16□□□□□ -1.9
KDM1A-204ENST00000481879 SERINC4A6NH21 518 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 H3BUI4 141 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 DTNBO60941 627 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 FGAP02671 866 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 CSF1RP07333 972 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 PDGFRBP09619 1106 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 CCND1P24385 295 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 ADORA2AP29274 412 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 ME1P48163 572 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 HTR6P50406 440 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 MAP2K6P52564 334 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 MYO1EQ12965 1108 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 LY6KQ17RY6 165 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 C4orf46Q504U0 113 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 PIP4P1Q86T03 277 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 PIM3Q86V86 326 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 SFTPA1Q8IWL2 248 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 RAVER1Q8IY67 606 aaKnown RBP3.15□□□□□ -1.91
KDM1A-204ENST00000481879 IZUMO1Q8IYV9 350 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 ABRAQ8N0Z2 381 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 SIRT6Q8N6T7 355 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 BRIX1Q8TDN6 353 aaKnown RBP3.15□□□□□ -1.91
KDM1A-204ENST00000481879 CHMP4CQ96CF2 233 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 HOOK2Q96ED9 719 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 MMS19Q96T76 1030 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 HIPK2Q9H2X6 1198 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 AASDHPPTQ9NRN7 309 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 XPR1Q9UBH6 696 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 AMFRQ9UKV5 643 aa3.15□□□□□ -1.91
KDM1A-204ENST00000481879 LUC7L2Q9Y383 392 aaKnown RBP3.15□□□□□ -1.91
KDM1A-204ENST00000481879 SMAD6O43541 496 aaKnown RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 TLR2O60603 784 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 ALDH1L1O75891 902 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 RNF8O76064 485 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 SNUPNO95149 360 aaKnown RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 MT-CO3P00414 261 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 PSG1P11464 419 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 CYP19A1P11511 503 aaPredicted RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 CYP2C9P11712 490 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 PHKG2P15735 406 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 RECQLP46063 649 aaPredicted RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 SOX8P57073 446 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 NKX6-1P78426 367 aaPredicted RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 ID2Q02363 134 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 MCL1Q07820 350 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 SRSF1Q07955 248 aaKnown RBP eCLIP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 PLS1Q14651 629 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 TTF1Q15361 905 aaPredicted RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 PLEKHG6Q3KR16 790 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 CCDC157Q569K6 752 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 DEF8Q6ZN54 512 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 DPY19L3Q6ZPD9 716 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 USP45Q70EL2 814 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 CATIPQ7Z7H3 387 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 ZNF280BQ86YH2 543 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 PNISRQ8TF01 805 aaKnown RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 MAP4K1Q92918 833 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 RSPRY1Q96DX4 576 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 THOC3Q96J01 351 aaKnown RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 PRR25Q96S07 402 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 RTFDC1Q9BY42 306 aaPredicted RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 CXorf36Q9H7Y0 433 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 TMEM184CQ9NVA4 438 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 HEY2Q9UBP5 337 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 IP6K2Q9UHH9 426 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 THRAP3Q9Y2W1 955 aaKnown RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 TMX2Q9Y320 296 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 HS3ST3B1Q9Y662 390 aa3.14□□□□□ -1.91
KDM1A-204ENST00000481879 TCF20Q9UGU0 1960 aaKnown RBP3.14□□□□□ -1.91
KDM1A-204ENST00000481879 CES2O00748 559 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 VNN1O95497 513 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 IL33O95760 270 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 XRCC6P12956 609 aaKnown RBP eCLIP3.13□□□□□ -1.91
KDM1A-204ENST00000481879 DGKEP52429 567 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 PSG6Q00889 435 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 PIN1Q13526 163 aaPredicted RBP3.13□□□□□ -1.91
KDM1A-204ENST00000481879 KHDC1LQ5JSQ8 128 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 TMEM240Q5SV17 173 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 ODR4Q5SWX8 454 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 ANO7Q6IWH7 933 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 LVRNQ6Q4G3 990 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 LIX1LQ8IVB5 337 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.13□□□□□ -1.912e-6■■□□□ 12.9
KDM1A-204ENST00000481879 KRT78Q8N1N4 520 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 ARFGAP1Q8N6T3 406 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 RBMXL3Q8N7X1 1067 aaKnown RBP3.13□□□□□ -1.91
KDM1A-204ENST00000481879 ZNF548Q8NEK5 533 aaPredicted RBP3.13□□□□□ -1.91
KDM1A-204ENST00000481879 MESP1Q9BRJ9 268 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 SARS2Q9NP81 518 aaKnown RBP3.13□□□□□ -1.91
KDM1A-204ENST00000481879 PCDHA6Q9UN73 950 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 SNX14Q9Y5W7 946 aa3.13□□□□□ -1.91
KDM1A-204ENST00000481879 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.13□□□□□ -1.91
KDM1A-204ENST00000481879 SHROOM4Q9ULL8 1493 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms