RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 GRIK1P39086 918 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 KLK7P49862 253 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
SSBP1-210ENST00000481508 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-210ENST00000481508 OTOP3Q7RTS5 596 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 GPRIN1Q7Z2K8 1008 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 GPIHBP1Q8IV16 184 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 ZDHHC14Q8IZN3 488 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 ELMOD1Q8N336 334 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 PPM1KQ8N3J5 372 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 TFAP2BQ92481 460 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 ASIC4Q96FT7 647 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 TNIP3Q96KP6 325 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 MED10Q9BTT4 135 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 VPS16Q9H269 839 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 NDST4Q9H3R1 872 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 KRT82Q9NSB4 513 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 RALYQ9UKM9 306 aaKnown RBP11.23□□□□□ -0.61
SSBP1-210ENST00000481508 CDH7Q9ULB5 785 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-210ENST00000481508 USTQ9Y2C2 406 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 NR2E1Q9Y466 385 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 FANCMQ8IYD8 2048 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 GTPBP10A4D1E9 387 aaKnown RBP11.22□□□□□ -0.61
SSBP1-210ENST00000481508 BECN2A8MW95 431 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 HHLA1C9JL84 531 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 AP1G2O75843 785 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-210ENST00000481508 PTMSP20962 102 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 FCARP24071 287 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 GABRR2P28476 465 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 AVPR2P30518 371 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 COPB1P53618 953 aaKnown RBP11.22□□□□□ -0.61
SSBP1-210ENST00000481508 RPL10AP62906 217 aaKnown RBP11.22□□□□□ -0.61
SSBP1-210ENST00000481508 VEPH1Q14D04 833 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 PTPN21Q16825 1174 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 IQCEQ6IPM2 695 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 PARM1Q6UWI2 310 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 VSTM1Q6UX27 236 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 FGF14Q92915 247 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 JAKMIP2Q96AA8 810 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 RMDN1Q96DB5 314 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 RSPRY1Q96DX4 576 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 TMEM176AQ96HP8 235 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 C8orf48Q96LL4 319 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 HEXIM2Q96MH2 286 aaKnown RBP11.22□□□□□ -0.61
SSBP1-210ENST00000481508 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 CBX8Q9HC52 389 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 ACP6Q9NPH0 428 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 LIMA1Q9UHB6 759 aaKnown RBP11.22□□□□□ -0.61
SSBP1-210ENST00000481508 ASB3Q9Y575 518 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 PCDHB4Q9Y5E5 795 aa11.22□□□□□ -0.61
SSBP1-210ENST00000481508 ANHXE9PGG2 379 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 TULP2O00295 520 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 TRIM66O15016 1216 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 EPHB6O15197 1021 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 NARSO43776 548 aaKnown RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 BRD2P25440 801 aaKnown RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 PGFP49763 221 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 ZNF165P49910 485 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 ZNF132P52740 706 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 MAP3K7CLP57077 242 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 GCNT1Q02742 428 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 CETN1Q12798 172 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 IFRD2Q12894 506 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 HTR4Q13639 388 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 EXOC3L4Q17RC7 722 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 GOLGA7BQ2TAP0 167 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 FAM78AQ5JUQ0 283 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 CYP4A22Q5TCH4 519 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 TMEM270Q6UE05 265 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 CLEC20AQ6ZU45 233 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 ITIH5Q86UX2 942 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 LUZP1Q86V48 1076 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 TTC30AQ86WT1 665 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 RBBP8NLQ8NC74 664 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 SCAMP5Q8TAC9 235 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 RIN3Q8TB24 985 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 CYFIP2Q96F07 1278 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 SMARCD1Q96GM5 515 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 SPATA17Q96L03 361 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 HNRNPABQ99729 332 aaKnown RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 KXD1Q9BQD3 176 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 LSM14BQ9BX40 385 aaKnown RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 PLA2G2FQ9BZM2 168 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 GPR88Q9GZN0 384 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 SMG9Q9H0W8 520 aaKnown RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 GANQ9H2C0 597 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 ATXN3LQ9H3M9 355 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 KCNK12Q9HB15 430 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 CSNK1G1Q9HCP0 422 aa11.21□□□□□ -0.61
SSBP1-210ENST00000481508 UBE2TQ9NPD8 197 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.21□□□□□ -0.61
SSBP1-210ENST00000481508 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms