RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CCDC43Q96MW1 224 aaKnown RBP7.12□□□□□ -1.27
LRCH3-216ENST00000481048 EIF2AQ9BY44 585 aaKnown RBP7.12□□□□□ -1.27
LRCH3-216ENST00000481048 MFSD1Q9H3U5 465 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 FZD8Q9H461 694 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 TUFT1Q9NNX1 390 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 MAN1C1Q9NR34 630 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 PRMT7Q9NVM4 692 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-216ENST00000481048 MARCH5Q9NX47 278 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 ZDHHC7Q9NXF8 308 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 EPS15L1Q9UBC2 864 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 WNT16Q9UBV4 365 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 PARP2Q9UGN5 583 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 CDH22Q9UJ99 828 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 DUSP12Q9UNI6 340 aa7.12□□□□□ -1.27
LRCH3-216ENST00000481048 ZFP37Q9Y6Q3 630 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-216ENST00000481048 NOTCH4Q99466 2003 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 MYH15Q9Y2K3 1946 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 OR14I1A6ND48 311 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 BTBD18B2RXH4 712 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 H0Y858 1186 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 TADA2AO75478 443 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 HTR3BO95264 441 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 PDGFBP01127 241 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 SSBP05455 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ASGR2P07307 311 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 AOC1P19801 751 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 RPL10P27635 214 aaKnown RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 RPA1P27694 616 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 MLH1P40692 756 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 NBL1P41271 181 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 SCNN1GP51170 649 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ELAVL2Q12926 359 aaKnown RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 CAPSQ13938 189 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 SAFBQ15424 915 aaKnown RBP eCLIP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 MAPK6Q16659 721 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ME3Q16798 604 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ADGRF1Q5T601 910 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ERICH6BQ5W0A0 696 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 FUT10Q6P4F1 479 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 PDXDC1Q6P996 788 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 TAS1R1Q7RTX1 841 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ZBTB8OSQ8IWT0 167 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 DIS3L2Q8IYB7 885 aaKnown RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 TMEM105Q8N8V8 129 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 NSUN7Q8NE18 718 aaKnown RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ERMNQ8TAM6 284 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 BORCS6Q96GS4 357 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 CPB2Q96IY4 423 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ADPGKQ9BRR6 497 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 POLR3CQ9BUI4 534 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 G6PC3Q9BUM1 346 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 NT5C3AQ9H0P0 336 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 C2orf40Q9H1Z8 148 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 SEMA4AQ9H3S1 761 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 GJB4Q9NTQ9 266 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 MIOSQ9NXC5 875 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ADAM28Q9UKQ2 775 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 ZNF281Q9Y2X9 895 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 PRG3Q9Y2Y8 225 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-216ENST00000481048 HES2Q9Y543 173 aa7.11□□□□□ -1.27
LRCH3-216ENST00000481048 CLUHO75153 1309 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 SF3B1O75533 1304 aaKnown RBP eCLIP7.1□□□□□ -1.275e-8■■■■■ 77.5
LRCH3-216ENST00000481048 NOTOA8MTQ0 251 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 ACKR2O00590 384 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 N4BP3O15049 544 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 TGM5O43548 720 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 THP07101 528 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 HNRNPA1P09651 372 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 CYP11B2P19099 503 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 ATP2B1P20020 1258 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 NAMPTP43490 491 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 RBM25P49756 843 aaKnown RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 NEK4P51957 841 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 EFNA5P52803 228 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 DAB2P98082 770 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 TUSC3Q13454 348 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 PDIA5Q14554 519 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 SSPNQ14714 243 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 CDCA2Q69YH5 1023 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 APBB1IPQ7Z5R6 666 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 CATSPER3Q86XQ3 398 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 SLC44A3Q8N4M1 653 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 PIGOQ8TEQ8 1089 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 SMG7Q92540 1137 aaKnown RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 KCNC2Q96PR1 638 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 KIF2CQ99661 725 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 LLPHQ9BRT6 129 aaKnown RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 TTPALQ9BTX7 342 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 POLR3FQ9H1D9 316 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 FOXP1Q9H334 677 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 KCNG1Q9UIX4 513 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 FBXL21Q9UKT6 434 aa7.1□□□□□ -1.27
LRCH3-216ENST00000481048 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-216ENST00000481048 PHLPP2Q6ZVD8 1323 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 LRRIQ4A6NIV6 560 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms