RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 FAM84AQ96KN4 292 aa11.55□□□□□ -0.56
CCDC58-205ENST00000479899 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
CCDC58-205ENST00000479899 TMEM9BQ9NQ34 198 aa11.55□□□□□ -0.56
CCDC58-205ENST00000479899 DDX43Q9NXZ2 648 aaKnown RBP11.55□□□□□ -0.56
CCDC58-205ENST00000479899 THADAQ6YHU6 1953 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 NBEAQ8NFP9 2946 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 C2orf78A6NCI8 922 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 KHNYNO15037 678 aaKnown RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 HCRTO43612 131 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 ITGB3P05106 788 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 USP17L7P0C7H9 530 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 PLCG1P19174 1290 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 UBA7P41226 1012 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 ZNF131P52739 623 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 RPL10AP62906 217 aaKnown RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 TFAMQ00059 246 aaKnown RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 ZNF268Q14587 947 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 KCNB1Q14721 858 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 NFE2Q16621 373 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 EML3Q32P44 896 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 USP39Q53GS9 565 aaKnown RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 SPATA2LQ8IUW3 424 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 PDCL2Q8N4E4 241 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 DEFB124Q8NES8 71 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 SH3RF2Q8TEC5 729 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 POMGNT1Q8WZA1 660 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 PIGKQ92643 395 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 CCDC97Q96F63 343 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 GTF3C4Q9UKN8 822 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
CCDC58-205ENST00000479899 ATXN2Q99700 1313 aaKnown RBP11.54□□□□□ -0.56
CCDC58-205ENST00000479899 CNOT1A5YKK6 2376 aaKnown RBP11.53□□□□□ -0.56
CCDC58-205ENST00000479899 H3BQV1 296 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 HUS1O60921 280 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 NOL4O94818 638 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 NEFLP07196 543 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 KRT19P08727 400 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 MAPK8P45983 427 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 RAB15P59190 212 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 GTF2BQ00403 316 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 MYL7Q01449 175 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 MDGA1Q8NFP4 955 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 RAD54LQ92698 747 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 GLMNQ92990 594 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 FAM213AQ9BRX8 229 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 CCSER1Q9C0I3 900 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 LINC00597Q9H2U6 94 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 TMEM206Q9H813 350 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 ZFAND3Q9H8U3 227 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 BLOC1S4Q9NUP1 217 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 BCCIPQ9P287 314 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC58-205ENST00000479899 EBF1Q9UH73 591 aa11.53□□□□□ -0.56
CCDC58-205ENST00000479899 ANAPC1Q9H1A4 1944 aa11.52□□□□□ -0.56
CCDC58-205ENST00000479899 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 IL18RAPO95256 599 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 NFATC1O95644 943 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 SCP2P22307 547 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 DDIT3P35638 169 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 PNPLA4P41247 253 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 PSMC1P62191 440 aaKnown RBP11.52□□□□□ -0.57
CCDC58-205ENST00000479899 GRIN1Q05586 938 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 SCARA3Q6AZY7 606 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 SLFN12LQ6IEE8 588 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 CRELD2Q6UXH1 353 aaPredicted RBP11.52□□□□□ -0.57
CCDC58-205ENST00000479899 DYMQ7RTS9 669 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 ADGRF2Q8IZF7 708 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 FSIP1Q8NA03 581 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 ZSWIM2Q8NEG5 633 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 LEO1Q8WVC0 666 aaPredicted RBP11.52□□□□□ -0.57
CCDC58-205ENST00000479899 RLN3Q8WXF3 142 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 LARP4BQ92615 738 aaKnown RBP11.52□□□□□ -0.57
CCDC58-205ENST00000479899 TRMT2BQ96GJ1 504 aaKnown RBP11.52□□□□□ -0.57
CCDC58-205ENST00000479899 SCNM1Q9BWG6 230 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 ZDHHC4Q9NPG8 344 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 TBC1D7Q9P0N9 293 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 KIF3AQ9Y496 699 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 SNX9Q9Y5X1 595 aa11.52□□□□□ -0.57
CCDC58-205ENST00000479899 TNRC6BQ9UPQ9 1833 aaKnown RBP11.51□□□□□ -0.57
CCDC58-205ENST00000479899 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 GOLGA8IPA6NC78 632 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 GOLGA8JA6NMD2 632 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 K7EQS6 105 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
CCDC58-205ENST00000479899 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
CCDC58-205ENST00000479899 HDCP19113 662 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 OPRD1P41143 372 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 IRX4P78413 519 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 KDSRQ06136 332 aa11.51□□□□□ -0.57
CCDC58-205ENST00000479899 IFRD2Q12894 506 aaPredicted RBP11.51□□□□□ -0.57
CCDC58-205ENST00000479899 TRIM61Q5EBN2 209 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms