RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ZFYVE28Q9HCC9 887 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 MARCOQ9UEW3 520 aaPredicted RBP14.9□□□□□ -0.02
COL20A1-206ENST00000479501 TSPAN16Q9UKR8 245 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 ITGA11Q9UKX5 1188 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 RIPK3Q9Y572 518 aa14.9□□□□□ -0.02
COL20A1-206ENST00000479501 C17orf102A2RUQ5 167 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 POLBP06746 335 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 OCA2Q04671 838 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 KDELC2Q7Z4H8 507 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 PRELID2Q8N945 189 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 TFB1MQ8WVM0 346 aaKnown RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 SALL4Q9UJQ4 1053 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 TRIM33Q9UPN9 1127 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 MYPNQ86TC9 1320 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 DUOX1Q9NRD9 1551 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 CCDC78A2IDD5 438 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 LACTBL1A8MY62 500 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 FASTKD1Q53R41 847 aaKnown RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 MROH9Q5TGP6 573 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 TTC39BQ5VTQ0 682 aaPredicted RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 TDRD10Q5VZ19 366 aaKnown RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 MREGQ8N565 214 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 DTNBP1Q96EV8 351 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 TRPV6Q9H1D0 765 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 DDIT4Q9NX09 232 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 SHOC2Q9UQ13 582 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 NAALADL1Q9UQQ1 740 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 F8VP50 259 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 ACO1P21399 889 aaKnown RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 HOXD10P28358 340 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 HIC1Q14526 733 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 GRIK4Q16099 956 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 PDCD6IPQ8WUM4 868 aaKnown RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 SLIT2O94813 1529 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 PAEPP09466 180 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 XPAP23025 273 aaPredicted RBP14.89□□□□□ -0.03
COL20A1-206ENST00000479501 EPHB2P29323 1055 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 SERPINB4P48594 390 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 SKOR1P84550 965 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 FBXO47Q5MNV8 452 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 PACS2Q86VP3 889 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 MANSC1Q9H8J5 431 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 VTA1Q9NP79 307 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 DNPEPQ9ULA0 475 aa14.89□□□□□ -0.03
COL20A1-206ENST00000479501 DNALI1O14645 258 aaPredicted RBP14.88□□□□□ -0.03
COL20A1-206ENST00000479501 MTSS1O43312 755 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 ANP32DO95626 131 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 CAPSQ13938 189 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 FAM131BQ86XD5 332 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 ATPAF2Q8N5M1 289 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 AGR3Q8TD06 166 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 ALG3Q92685 438 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 PGM2Q96G03 612 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 SNTG2Q9NY99 539 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 COL20A1Q9P218 1284 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 PDHXO00330 501 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 BNIP3LO60238 219 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 B3GAT3O94766 335 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 CHEK2O96017 543 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 ADORA2AP29274 412 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 SPRP35270 261 aaPredicted RBP14.88□□□□□ -0.03
COL20A1-206ENST00000479501 SCTRP47872 440 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 IFI35P80217 286 aaPredicted RBP14.88□□□□□ -0.03
COL20A1-206ENST00000479501 TTMPQ5BVD1 217 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 GLB1LQ6UWU2 654 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 KATNAL2Q8IYT4 538 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 MFSD14AQ96MC6 490 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
COL20A1-206ENST00000479501 AP1G2O75843 785 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 CELF3Q5SZQ8 465 aaKnown RBP14.88□□□□□ -0.03
COL20A1-206ENST00000479501 RARS2Q5T160 578 aaKnown RBP14.88□□□□□ -0.03
COL20A1-206ENST00000479501 OR5B17Q8NGF7 314 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 KLRG1Q96E93 195 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 PCYOX1Q9UHG3 505 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 GRID1Q9ULK0 1009 aa14.88□□□□□ -0.03
COL20A1-206ENST00000479501 KLRG2A4D1S0 409 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-206ENST00000479501 INPP1P49441 399 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 PCYT1AP49585 367 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 SLC12A1Q13621 1099 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 UGP2Q16851 508 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 KIRREL3Q8IZU9 778 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 FAM84AQ96KN4 292 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 KREMEN1Q96MU8 473 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 ING2Q9H160 280 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 SLC24A2Q9UI40 661 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 CYB561D2O14569 222 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 PSMD3O43242 534 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 PECAM1P16284 738 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-206ENST00000479501 DRG2P55039 364 aaKnown RBP14.87□□□□□ -0.03
COL20A1-206ENST00000479501 MAMLD1Q13495 774 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 SEMA4DQ92854 862 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 COPS5Q92905 334 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 ZNF669Q96BR6 464 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-206ENST00000479501 FAM111AQ96PZ2 611 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 GBA2Q9HCG7 927 aaPredicted RBP14.87□□□□□ -0.03
COL20A1-206ENST00000479501 AP4E1Q9UPM8 1137 aa14.87□□□□□ -0.03
COL20A1-206ENST00000479501 TADA2AO75478 443 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms