RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 GPR162Q16538 588 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 ETNPPLQ8TBG4 499 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 BRSK1Q8TDC3 778 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 PLEKHA8Q96JA3 519 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 FBXL18Q96ME1 805 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 NCKIPSDQ9NZQ3 722 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 HACD3Q9P035 362 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 B3GNT3Q9Y2A9 372 aa13.19□□□□□ -0.3
RTFDC1-207ENST00000477573 DENRO43583 198 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 ITM2AO43736 263 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 ADSLP30566 484 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 IL9RQ01113 521 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 CDK18Q07002 472 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 GALNT1Q10472 559 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 APOFQ13790 326 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 RPS6KA1Q15418 735 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 CCBE1Q6UXH8 406 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 CLVS1Q8IUQ0 354 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 MGARPQ8TDB4 240 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.34e-8■■■■■ 28.3
RTFDC1-207ENST00000477573 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 SEMA4AQ9H3S1 761 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 Q9H521 79 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 C17orf75Q9HAS0 396 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 LZTS1Q9Y250 596 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 MYMKA6NI61 221 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 PEX14O75381 377 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 SULT1C4O75897 302 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 KLHL2O95198 593 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 ICAM1P05362 532 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 CD48P09326 243 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 ETFBP38117 255 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 C21orf59P57076 290 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 GJA9P57773 515 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 DSTNP60981 165 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 KIAA1841Q6NSI8 718 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 CLNKQ7Z7G1 428 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 LRRC6Q86X45 466 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 SLC38A6Q8IZM9 456 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 GPC2Q8N158 579 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 MORC4Q8TE76 937 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 CDHR1Q96JP9 859 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 PHF12Q96QT6 1004 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 MOSPD1Q9UJG1 213 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 ANGPTL3Q9Y5C1 460 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
RTFDC1-207ENST00000477573 BUB1O43683 1085 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PEX1O43933 1283 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 FDX1P10109 184 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 GLULP15104 373 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 CCNE1P24864 410 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 RCVRNP35243 200 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 STT3AP46977 705 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PRELPP51888 382 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 LRRC63Q05C16 580 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 KCNA1Q09470 495 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 NBPF12Q5TAG4 269 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 FRA10AC1Q70Z53 315 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 CADM3Q8N126 398 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 TERB1Q8NA31 727 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 C10orf82Q8WW14 230 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 CDKL2Q92772 493 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 P2RX5Q93086 422 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PTCD3Q96EY7 689 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 GRIP2Q9C0E4 1043 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 MARCH7Q9H992 704 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 H3BNX3 289 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 SPAG7O75391 227 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 ACTR3P61158 418 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 KYNUQ16719 465 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 ASTE1Q2TB18 679 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 TIGD2Q4W5G0 525 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 AGMOQ6ZNB7 445 aa13.17□□□□□ -0.3
RTFDC1-207ENST00000477573 PEX26Q7Z412 305 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms