RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 ZNF513Q8N8E2 541 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-206ENST00000477546 SYT2Q8N9I0 419 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-206ENST00000477546 ENGASEQ8NFI3 743 aa11.2□□□□□ -0.62
TRAIP-206ENST00000477546 ZNF396Q96N95 335 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-206ENST00000477546 SEPT5Q99719 369 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-206ENST00000477546 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
TRAIP-206ENST00000477546 CCDC113Q9H0I3 377 aa11.2□□□□□ -0.62
TRAIP-206ENST00000477546 BTBD3Q9Y2F9 522 aa11.2□□□□□ -0.62
TRAIP-206ENST00000477546 USP20Q9Y2K6 914 aa11.2□□□□□ -0.62
TRAIP-206ENST00000477546 NFE2L3Q9Y4A8 694 aa11.2□□□□□ -0.62
TRAIP-206ENST00000477546 HEMK1Q9Y5R4 338 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-206ENST00000477546 F13A1P00488 732 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 F11P03951 625 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 EDN1P05305 212 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 GABRG2P18507 467 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 ACTN2P35609 894 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 GRM5P41594 1212 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 NPTX2P47972 431 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 MAPK7Q13164 816 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 SERINC3Q13530 473 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 SUZ12Q15022 739 aaKnown RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 GAB4Q2WGN9 574 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 MGAT5BQ3V5L5 792 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 USP37Q86T82 979 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 ERICH1Q86X53 443 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 SFTPA1Q8IWL2 248 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 KRI1Q8N9T8 703 aaKnown RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 MRPS31Q92665 395 aaKnown RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 CLIC6Q96NY7 704 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 KMT5AQ9NQR1 393 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 KCND2Q9NZV8 630 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 SRPRBQ9Y5M8 271 aaKnown RBP11.19□□□□□ -0.62
TRAIP-206ENST00000477546 DOPEY1Q5JWR5 2465 aa11.19□□□□□ -0.62
TRAIP-206ENST00000477546 CREBBPQ92793 2442 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 NPHP3-ACAD11A0A0J9YXS1 232 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 SLC16A4O15374 487 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 KRT18P05783 430 aaKnown RBP11.18□□□□□ -0.62
TRAIP-206ENST00000477546 MAOBP27338 520 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 GRK6P43250 576 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 PKP1Q13835 747 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 MCM6Q14566 821 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 HLA-BQ31612 363 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 ARHGAP40Q5TG30 622 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 EMC10Q5UCC4 262 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 BROXQ5VW32 411 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 USP49Q70CQ1 688 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 CEP120Q8N960 986 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 LRRC15Q8TF66 581 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 DNASE2BQ8WZ79 361 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 LARP4BQ92615 738 aaKnown RBP11.18□□□□□ -0.62
TRAIP-206ENST00000477546 RAD54LQ92698 747 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 LGMNQ99538 433 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 TMEM206Q9H813 350 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 C17orf75Q9HAS0 396 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 CPNE5Q9HCH3 593 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 CNTN3Q9P232 1028 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
TRAIP-206ENST00000477546 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 PCDHGA1Q9Y5H4 931 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 ABCA12Q86UK0 2595 aa11.18□□□□□ -0.62
TRAIP-206ENST00000477546 A0A0A0MRY4 1105 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 MYMKA6NI61 221 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 SFI1A8K8P3 1242 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 K7ERI5 159 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 SPTLC2O15270 562 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 BRINP1O60477 761 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 NDUFS2O75306 463 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 TBCAO75347 108 aaKnown RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 FAM13AO94988 1023 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 KAT7O95251 611 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 YEATS4O95619 227 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 APODP05090 189 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 CDK4P11802 303 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 PLS3P13797 630 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 EIF2DP41214 584 aaKnown RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 AARSP49588 968 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 C4orf17Q53FE4 359 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 ARMCX5Q6P1M9 558 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 ZCCHC9Q8N567 271 aaKnown RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 TTC16Q8NEE8 873 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 GIPC2Q8TF65 315 aa11.17□□□□□ -0.62
TRAIP-206ENST00000477546 SNRNP27Q8WVK2 155 aaKnown RBP11.17□□□□□ -0.62
TRAIP-206ENST00000477546 ACAP3Q96P50 834 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms