RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 ARHGAP6O43182 974 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 RTN2O75298 545 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 ZMYND10O75800 440 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 NDUFA10O95299 355 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 LRG1P02750 347 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 ACADSBP45954 432 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 SLC5A3P53794 718 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 RBM10P98175 930 aaKnown RBP17.06■□□□□ 0.32
VHL-203ENST00000477538 VEPH1Q14D04 833 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 RAB41Q5JT25 222 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 PHF13Q86YI8 300 aaPredicted RBP17.06■□□□□ 0.32
VHL-203ENST00000477538 EFHBQ8N7U6 833 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 VN1R2Q8NFZ6 395 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 CASP10Q92851 521 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 C11orf70Q9BRQ4 267 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 SYNCQ9H7C4 482 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 TJP2Q9UDY2 1190 aa17.06■□□□□ 0.32
VHL-203ENST00000477538 CDH23Q9H251 3354 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 SLC38A8A6NNN8 435 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 E5RJQ4 531 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 PIK3R2O00459 728 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 TNFRSF10BO14763 440 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 ZNF263O14978 683 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 GABBR2O75899 941 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 LCA5LO95447 670 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 GLP2RO95838 553 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 FTLP02792 175 aaPredicted RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 ERBB2P04626 1255 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 SRGAP2BP0DMP2 458 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 LCP1P13796 627 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 MMP8P22894 467 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 HOXA9P31269 272 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 RPL34P49207 117 aaKnown RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 TKTL1P51854 596 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 SNX16P57768 344 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 ADIGQ0VDE8 80 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 MMS22LQ6ZRQ5 1243 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 DENND5BQ6ZUT9 1274 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 MON1BQ7L1V2 547 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 DNAAF5Q86Y56 855 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 NUP93Q8N1F7 819 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 SIX6OS1Q8N1H7 587 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 DEFB123Q8N688 67 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 ZNF830Q96NB3 372 aaPredicted RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 CDX2Q99626 313 aaPredicted RBP17.05■□□□□ 0.32
VHL-203ENST00000477538 ISCUQ9H1K1 167 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 KCNF1Q9H3M0 494 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 DZANK1Q9NVP4 752 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 ADAM22Q9P0K1 906 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
VHL-203ENST00000477538 LINC01565O15544 149 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 RFPL2O75678 378 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 RTN3O95197 1032 aaPredicted RBP17.04■□□□□ 0.32
VHL-203ENST00000477538 CALB1P05937 261 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 HNRNPA1P09651 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
VHL-203ENST00000477538 CSH1P0DML2 217 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 CSH2P0DML3 217 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
VHL-203ENST00000477538 MTMR3Q13615 1198 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 SPA17Q15506 151 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 C2CD6Q53TS8 623 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 CYP4A22Q5TCH4 519 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 TMEM110Q86TL2 294 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 ITIH5Q86UX2 942 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 MCOLN2Q8IZK6 566 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 ELMOD1Q8N336 334 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 SCAMP5Q8TAC9 235 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 C18orf8Q96DM3 657 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 MIS12Q9H081 205 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 ASB3Q9Y575 518 aa17.04■□□□□ 0.32
VHL-203ENST00000477538 CCL16O15467 120 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 GABRB2P47870 512 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 USP46P62068 366 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 PTP4A2Q12974 167 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 ADAM15Q13444 863 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 TAF12Q16514 161 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 C10orf76Q5T2E6 689 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 ACRBPQ8NEB7 543 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 PSMG2Q969U7 264 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 TRIM11Q96F44 468 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 VCPIP1Q96JH7 1222 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 GUCD1Q96NT3 240 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 ULBP1Q9BZM6 244 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 FBXO44Q9H4M3 255 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 SFXN1Q9H9B4 322 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 CNGB3Q9NQW8 809 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 COMMD8Q9NX08 183 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 STRIP2Q9ULQ0 834 aa17.03■□□□□ 0.32
VHL-203ENST00000477538 MAGED2Q9UNF1 606 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 571.4 ms