RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RNF38Q9H0F5 515 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 SMYD3Q9H7B4 428 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 VRTNQ9H8Y1 702 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 CPQQ9Y646 472 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 ZNF638Q14966 1978 aaKnown RBP12.09□□□□□ -0.47
HDLBP-236ENST00000477477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-236ENST00000477477 CLDN5O00501 218 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 PHACTR2O75167 634 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 ABL1P00519 1130 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 CYP17A1P05093 508 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 MPLP40238 635 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 AFMP43652 599 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 CASP4P49662 377 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 IFRD2Q12894 506 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-236ENST00000477477 GOLGA5Q8TBA6 731 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 DDX1Q92499 740 aaKnown RBP12.09□□□□□ -0.47
HDLBP-236ENST00000477477 SLITRK1Q96PX8 696 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 DUSP15Q9H1R2 295 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-236ENST00000477477 RXFP3Q9NSD7 469 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 SMPD4Q9NXE4 827 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 TPRP12270 2363 aaKnown RBP12.09□□□□□ -0.47
HDLBP-236ENST00000477477 ANAPC1Q9H1A4 1944 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 EPG5Q9HCE0 2579 aa12.09□□□□□ -0.47
HDLBP-236ENST00000477477 PTPRDP23468 1912 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 GREB1Q4ZG55 1949 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 ACACBO00763 2458 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-236ENST00000477477 K7EQS6 105 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 SLC9A3R1O14745 358 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-236ENST00000477477 KLRC4O43908 158 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 RHOBTB1O94844 696 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 YWHAQP27348 245 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 DGKEP52429 567 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 AP3M2P53677 418 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 SEC13P55735 322 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 CLDN10P78369 228 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 BIRC3Q13489 604 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 NCOA4Q13772 614 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 DHCR24Q15392 516 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 ELF2Q15723 593 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 ZNF699Q32M78 642 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 ATL3Q6DD88 541 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 IL31Q6EBC2 164 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 FAM35AQ86V20 835 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDLBP-236ENST00000477477 SLC9A9Q8IVB4 645 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 HSCBQ8IWL3 235 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 ADGRG2Q8IZP9 1017 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 NUP93Q8N1F7 819 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 PDZD8Q8NEN9 1154 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 TSTD1Q8NFU3 115 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 OVCA2Q8WZ82 227 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 FBXO32Q969P5 355 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 VPS45Q9NRW7 570 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 CFAP97Q9P2B7 532 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 ATP8B3O60423 1300 aa12.08□□□□□ -0.48
HDLBP-236ENST00000477477 SDK1Q7Z5N4 2213 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 ANTXRLA6NF34 631 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 SCAMP3O14828 347 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 DCLK1O15075 740 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 CLSTN1O94985 981 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 RTN3O95197 1032 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 VNN1O95497 513 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 MBL2P11226 248 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 EIF2DP41214 584 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 SLC5A3P53794 718 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 CDH8P55286 799 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 STK4Q13043 487 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 PKP1Q13835 747 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 C2orf27AQ580R0 203 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 ZNF667Q5HYK9 610 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 SCARA5Q6ZMJ2 495 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 RASSF3Q86WH2 238 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 TMEM174Q8WUU8 243 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 KCNK16Q96T55 309 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 DMAP1Q9NPF5 467 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 EXOC1Q9NV70 894 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 DMAC2Q9NW81 257 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 SERTAD1Q9UHV2 236 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 MMP17Q9ULZ9 603 aa12.07□□□□□ -0.48
HDLBP-236ENST00000477477 HELZP42694 1942 aaKnown RBP12.07□□□□□ -0.48
HDLBP-236ENST00000477477 TNFRSF10BO14763 440 aa12.06□□□□□ -0.48
HDLBP-236ENST00000477477 TM4SF5O14894 197 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms