RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 HESX1Q9UBX0 185 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 CSH1P0DML2 217 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 CSH2P0DML3 217 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 FSHRP23945 695 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 GABRR2P28476 465 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 BCAT1P54687 386 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 FMO1Q01740 532 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 TAF10Q12962 218 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 TBX2Q13207 712 aaPredicted RBP16.76■□□□□ 0.27
COPS3-207ENST00000477299 VEPH1Q14D04 833 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 TAF12Q16514 161 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 FIGNQ5HY92 759 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 SPECC1LQ69YQ0 1117 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 GET4Q7L5D6 327 aaPredicted RBP16.76■□□□□ 0.27
COPS3-207ENST00000477299 ITIH5Q86UX2 942 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 CLEC4CQ8WTT0 213 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 MCRS1Q96EZ8 462 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 NUP58Q9BVL2 599 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 DNAI2Q9GZS0 605 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 ASAH2Q9NR71 780 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 IL37Q9NZH6 218 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 PCDHGC3Q9UN70 934 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 ASB3Q9Y575 518 aa16.76■□□□□ 0.27
COPS3-207ENST00000477299 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 TPM3P06753 285 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 PLEKP08567 350 aaPredicted RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 LCP1P13796 627 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 YWHAQP27348 245 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 KIF11P52732 1056 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 ADKP55263 362 aaKnown RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 MRPS5P82675 430 aaKnown RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 CYP4A22Q5TCH4 519 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 SFMBT2Q5VUG0 894 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 PDZD4Q76G19 769 aaPredicted RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 MYRFLQ96LU7 910 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 ASB2Q96Q27 587 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 TTLL2Q9BWV7 592 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 EDEM3Q9BZQ6 932 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 ATXN3LQ9H3M9 355 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 AIPL1Q9NZN9 384 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 GMIPQ9P107 970 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 MRPS23Q9Y3D9 190 aaKnown RBP16.75■□□□□ 0.27
COPS3-207ENST00000477299 DAAM1Q9Y4D1 1078 aa16.75■□□□□ 0.27
COPS3-207ENST00000477299 A0A1W2PQJ5 194 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 C2CD4DB7Z1M9 353 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 MED7O43513 233 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 ADCY5O95622 1261 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 USP17L7P0C7H9 530 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 FERP16591 822 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 KRT9P35527 623 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 PLA2G4AP47712 749 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 PDE6CP51160 858 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 TKTL1P51854 596 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 BPIFB4P59827 614 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 CDR2Q01850 454 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 ADIGQ0VDE8 80 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 STILQ15468 1287 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 RAB41Q5JT25 222 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 HGSNATQ68CP4 663 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 TXNDC8Q6A555 127 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 DNAAF5Q86Y56 855 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 FGF13Q92913 245 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 TRMT2BQ96GJ1 504 aaKnown RBP16.74■□□□□ 0.27
COPS3-207ENST00000477299 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 NECAB3Q96P71 396 aaPredicted RBP16.74■□□□□ 0.27
COPS3-207ENST00000477299 SLC22A12Q96S37 553 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 SYT11Q9BT88 431 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 ULBP1Q9BZM6 244 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 UBXN6Q9BZV1 441 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 NMUR1Q9HB89 426 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
COPS3-207ENST00000477299 OSER1Q9NX31 292 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 LUC7L2Q9Y383 392 aaKnown RBP16.74■□□□□ 0.27
COPS3-207ENST00000477299 USP3Q9Y6I4 520 aa16.74■□□□□ 0.27
COPS3-207ENST00000477299 HELZP42694 1942 aaKnown RBP16.74■□□□□ 0.27
COPS3-207ENST00000477299 NUP210Q8TEM1 1887 aaPredicted RBP16.73■□□□□ 0.27
COPS3-207ENST00000477299 C2orf78A6NCI8 922 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 GBP2P32456 591 aaPredicted RBP16.73■□□□□ 0.27
COPS3-207ENST00000477299 ZBED6P86452 979 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 ASIC2Q16515 512 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 WDR59Q6PJI9 974 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 BHLHA9Q7RTU4 235 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 ZNF571Q7Z3V5 609 aaPredicted RBP16.73■□□□□ 0.27
COPS3-207ENST00000477299 SCD5Q86SK9 330 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
COPS3-207ENST00000477299 NPAS3Q8IXF0 933 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 ATXN2LQ8WWM7 1075 aaKnown RBP16.73■□□□□ 0.27
COPS3-207ENST00000477299 CPA5Q8WXQ8 436 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 NECTIN4Q96NY8 510 aa16.73■□□□□ 0.27
COPS3-207ENST00000477299 CPXM1Q96SM3 734 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms