RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ADAT2Q7Z6V5 191 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 TMEM175Q9BSA9 504 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 ZCWPW1Q9H0M4 648 aa15.19■□□□□ 0.02
COL4A6-206ENST00000477085 RC3H2Q9HBD1 1191 aaKnown RBP15.19■□□□□ 0.02
COL4A6-206ENST00000477085 TRAPPC3O43617 180 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 PDGFRAP16234 1089 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 GPD1P21695 349 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 FGFR3P22607 806 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 SSR1P43307 286 aaKnown RBP15.18■□□□□ 0.02
COL4A6-206ENST00000477085 ACADSBP45954 432 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 WDR5P61964 334 aaKnown RBP15.18■□□□□ 0.02
COL4A6-206ENST00000477085 LONRF2Q1L5Z9 754 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 RAB41Q5JT25 222 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 FAM117BQ6P1L5 589 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 RSPO2Q6UXX9 243 aaPredicted RBP15.18■□□□□ 0.02
COL4A6-206ENST00000477085 CEP57Q86XR8 500 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 ZDHHC17Q8IUH5 632 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 LRRC43Q8N309 656 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 GPR161Q8N6U8 529 aaKnown RBP15.18■□□□□ 0.02
COL4A6-206ENST00000477085 ACSF2Q96CM8 615 aaPredicted RBP15.18■□□□□ 0.02
COL4A6-206ENST00000477085 CFAP57Q96MR6 1250 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 VN1R3Q9BXE9 311 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 KLHL11Q9NVR0 708 aa15.18■□□□□ 0.02
COL4A6-206ENST00000477085 KRIT1O00522 736 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 SYN3O14994 580 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 CAPN2P17655 700 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 SIX1Q15475 284 aaPredicted RBP15.17■□□□□ 0.02
COL4A6-206ENST00000477085 RTP2Q5QGT7 225 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 FUT10Q6P4F1 479 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 CYP4V2Q6ZWL3 525 aaPredicted RBP15.17■□□□□ 0.02
COL4A6-206ENST00000477085 SLC26A9Q7LBE3 791 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 KATNAL2Q8IYT4 538 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 SMARCD1Q96GM5 515 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 PEBP4Q96S96 227 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 HINFPQ9BQA5 517 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 CNPY3Q9BT09 278 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 C11orf84Q9BUA3 381 aaPredicted RBP15.17■□□□□ 0.02
COL4A6-206ENST00000477085 PRDM10Q9NQV6 1147 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
COL4A6-206ENST00000477085 ARHGEF37A1IGU5 675 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 DPYSL4O14531 572 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 TBC1D4O60343 1298 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 MIPP30301 263 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 GJC1P36383 396 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 TKTL1P51854 596 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 MRPS5P82675 430 aaKnown RBP15.16■□□□□ 0.02
COL4A6-206ENST00000477085 SLC39A12Q504Y0 691 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 LRRC38Q5VT99 294 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 HFE2Q6ZVN8 426 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 OTOP2Q7RTS6 562 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 BHLHA9Q7RTU4 235 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 SLC13A5Q86YT5 568 aaPredicted RBP15.16■□□□□ 0.02
COL4A6-206ENST00000477085 RAPGEF5Q92565 580 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 KRT12Q99456 494 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 UBXN6Q9BZV1 441 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 VWA8A3KMH1 1905 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 LAMA2P24043 3122 aaKnown RBP15.16■□□□□ 0.02
COL4A6-206ENST00000477085 PI4K2BG5E9Z4 385 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 CAPN15O75808 1086 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 FYNP06241 537 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 CYP2F1P24903 491 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 SCNN1AP37088 669 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 EPHB4P54760 987 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 SLC8A3P57103 927 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 SNX16P57768 344 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 TUBB4BP68371 445 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 TSPY1Q01534 308 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 ADCY2Q08462 1091 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 KCNT1Q5JUK3 1230 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 PRELID2Q8N945 189 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 RNF25Q96BH1 459 aaPredicted RBP15.16■□□□□ 0.02
COL4A6-206ENST00000477085 ULBP1Q9BZM6 244 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 LRRC4Q9HBW1 653 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 IL23AQ9NPF7 189 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 PCSK1NQ9UHG2 260 aa15.16■□□□□ 0.02
COL4A6-206ENST00000477085 DMGDHQ9UI17 866 aaKnown RBP15.16■□□□□ 0.02
COL4A6-206ENST00000477085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL4A6-206ENST00000477085 NLRC5Q86WI3 1866 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 SF3B1O75533 1304 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 C3orf70A6NLC5 250 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 FSCN2O14926 492 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 ZMYND10O75800 440 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 ZRANB2O95218 330 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 TRUB2O95900 331 aaKnown RBP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 AMHP03971 560 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 RARAP10276 462 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 H2AFXP16104 143 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 ATP11AP98196 1134 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 ACAP1Q15027 740 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 CDO1Q16878 200 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 SMTNL2Q2TAL5 461 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 FBXO38Q6PIJ6 1188 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 ARCQ7LC44 396 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 RNF168Q8IYW5 571 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms