RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 FAM35AQ86V20 835 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 DCP1BQ8IZD4 617 aaKnown RBP18.67■□□□□ 0.58
SREBF1-211ENST00000476994 FLCNQ8NFG4 579 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 SLC2A14Q8TDB8 520 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 PHOX2BQ99453 314 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 AGPAT1Q99943 283 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 ZNF518BQ9C0D4 1074 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 CRISPLD1Q9H336 500 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 FAM86C1Q9NVL1 165 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 ZDHHC7Q9NXF8 308 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 TSPAN16Q9UKR8 245 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 DUSP12Q9UNI6 340 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 BZW2Q9Y6E2 419 aaKnown RBP18.67■□□□□ 0.58
SREBF1-211ENST00000476994 CLUHO75153 1309 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 DOCK8Q8NF50 2099 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 DDX3XO00571 662 aaKnown RBP eCLIP18.66■□□□□ 0.582e-8■□□□□ 10.8
SREBF1-211ENST00000476994 GFRA3O60609 400 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 MICAL2O94851 1124 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 CYP1A1P04798 512 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-211ENST00000476994 CDH5P33151 784 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-211ENST00000476994 EIF4A3P38919 411 aaKnown RBP18.66■□□□□ 0.58
SREBF1-211ENST00000476994 CACNA2D1P54289 1103 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 MAPRE1Q15691 268 aaKnown RBP18.66■□□□□ 0.58
SREBF1-211ENST00000476994 GOLGA7BQ2TAP0 167 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 CFAP221Q4G0U5 840 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 DENND1BQ6P3S1 775 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 RNF19BQ6ZMZ0 732 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 NXPE3Q969Y0 559 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 KCNF1Q9H3M0 494 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 SMOC2Q9H3U7 446 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 ANAPC1Q9H1A4 1944 aa18.66■□□□□ 0.58
SREBF1-211ENST00000476994 STK25O00506 426 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 SPATA31D3P0C874 917 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 CPB1P15086 417 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 CDR1P51861 262 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 SMARCB1Q12824 385 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 NFE2Q16621 373 aaPredicted RBP18.65■□□□□ 0.58
SREBF1-211ENST00000476994 TDRD12Q587J7 1177 aaKnown RBP18.65■□□□□ 0.58
SREBF1-211ENST00000476994 LIN9Q5TKA1 542 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 LILRA6Q6PI73 481 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 SPATA31D4Q6ZUB0 917 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 WDTC1Q8N5D0 677 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 TTC9BQ8N6N2 239 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 TMEM105Q8N8V8 129 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 ANKRD52Q8NB46 1076 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 ZMIZ2Q8NF64 920 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 FUBP3Q96I24 572 aaKnown RBP eCLIP18.65■□□□□ 0.58
SREBF1-211ENST00000476994 DNAI2Q9GZS0 605 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 ABCB6Q9NP58 842 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 ZNHIT6Q9NWK9 470 aaKnown RBP18.65■□□□□ 0.58
SREBF1-211ENST00000476994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.65■□□□□ 0.582e-6■■■□□ 17.8
SREBF1-211ENST00000476994 AFF4Q9UHB7 1163 aaKnown RBP18.65■□□□□ 0.58
SREBF1-211ENST00000476994 CYTH4Q9UIA0 394 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 NOTCH4Q99466 2003 aa18.65■□□□□ 0.58
SREBF1-211ENST00000476994 MED7O43513 233 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 TGM5O43548 720 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 RFPL2O75678 378 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 BEST1O76090 585 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 UNGP13051 313 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-211ENST00000476994 ANXA13P27216 316 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 ADORA2BP29275 332 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 GPD2P43304 727 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 ARPP19P56211 112 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 NOMO3P69849 1222 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 TSR1Q2NL82 804 aaKnown RBP18.64■□□□□ 0.57
SREBF1-211ENST00000476994 TPGS2Q68CL5 300 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 RAD9BQ6WBX8 426 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 C4orf50Q6ZRC1 276 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 CLEC20AQ6ZU45 233 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 TMTC1Q8IUR5 882 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 ATAD1Q8NBU5 361 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 ZNF461Q8TAF7 563 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 C2orf15Q8WU43 125 aaKnown RBP18.64■□□□□ 0.57
SREBF1-211ENST00000476994 PGLYRP2Q96PD5 576 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 SMOQ99835 787 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-211ENST00000476994 LHX5Q9H2C1 402 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 NHEJ1Q9H9Q4 299 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-211ENST00000476994 CSNK1G1Q9HCP0 422 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 KRT82Q9NSB4 513 aa18.64■□□□□ 0.57
SREBF1-211ENST00000476994 A0A087X0T9 212 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 SOWAHDA6NJG2 315 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 M0QYV0 167 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 TULP2O00295 520 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 ZNF263O14978 683 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 GABBR2O75899 941 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 SEC24AO95486 1093 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 FAM228BP0C875 321 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 BDNFP23560 247 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 MAGEA11P43364 429 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 CYP27A1Q02318 531 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 MTF1Q14872 753 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 PASD1Q8IV76 773 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 SIX5Q8N196 739 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 UBA3Q8TBC4 463 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 SMARCD1Q96GM5 515 aa18.63■□□□□ 0.57
SREBF1-211ENST00000476994 DUSP16Q9BY84 665 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms