RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NOP14P78316 857 aaKnown RBP17.22■□□□□ 0.35
COL1A1-205ENST00000476387 PPP3CAQ08209 521 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 DCAF17Q5H9S7 520 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-205ENST00000476387 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 ANKRD40Q6AI12 368 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 ELMO3Q96BJ8 720 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 DHTKD1Q96HY7 919 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-205ENST00000476387 TNIP3Q96KP6 325 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 ELOVL4Q9GZR5 314 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 EBF3Q9H4W6 596 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
COL1A1-205ENST00000476387 K7ESF4 209 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 TRDMT1O14717 391 aaKnown RBP17.21■□□□□ 0.35
COL1A1-205ENST00000476387 TCF3P15923 654 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 CNR2P34972 360 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 PDE6CP51160 858 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 GRSF1Q12849 480 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL1A1-205ENST00000476387 USP4Q13107 963 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 TMEM196Q5HYL7 178 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 KRT39Q6A163 491 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 SPOPLQ6IQ16 392 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 KLHL10Q6JEL2 608 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 RIN3Q8TB24 985 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 RMDN1Q96DB5 314 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 TRPC7Q9HCX4 862 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL1A1-205ENST00000476387 GCNT4Q9P109 453 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 GMEB2Q9UKD1 530 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 NME7Q9Y5B8 376 aa17.21■□□□□ 0.35
COL1A1-205ENST00000476387 MYO16Q9Y6X6 1858 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 OTOL1A6NHN0 477 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-205ENST00000476387 BIN1O00499 593 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 CKMP06732 381 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 PMS1P54277 932 aaKnown RBP17.2■□□□□ 0.34
COL1A1-205ENST00000476387 MTF1Q14872 753 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 ZNF77Q15935 545 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 TRIM68Q6AZZ1 485 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 LAIR1Q6GTX8 287 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 DENND5BQ6ZUT9 1274 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
COL1A1-205ENST00000476387 EXOC4Q96A65 974 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 SLC22A12Q96S37 553 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 MED10Q9BTT4 135 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 TTLL2Q9BWV7 592 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 SDCBP2Q9H190 292 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 ARHGAP26Q9UNA1 814 aa17.2■□□□□ 0.34
COL1A1-205ENST00000476387 BICDL2A1A5D9 508 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 ARSAP15289 507 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
COL1A1-205ENST00000476387 ASPAP45381 313 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 PPP3CCP48454 512 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 MORC3Q14149 939 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL1A1-205ENST00000476387 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 CPA6Q8N4T0 437 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 ARL14EPQ8N8R7 260 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-205ENST00000476387 FBXL13Q8NEE6 735 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 OSCP1Q8WVF1 389 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 ATP2A3Q93084 1043 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 CHFRQ96EP1 664 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 CYP2S1Q96SQ9 504 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 DUS2Q9NX74 493 aaKnown RBP17.19■□□□□ 0.34
COL1A1-205ENST00000476387 DLL3Q9NYJ7 618 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 ARMCX3Q9UH62 379 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-205ENST00000476387 CTNND2Q9UQB3 1225 aa17.19■□□□□ 0.34
COL1A1-205ENST00000476387 C2orf78A6NCI8 922 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 CHURC1-FNTBB4DL54 471 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 F8VP50 259 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 ATG13O75143 517 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 HDCP19113 662 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 SDHBP21912 280 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 FNTBP49356 437 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 NDST1P52848 882 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 DMWDQ09019 674 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 CCDC40Q4G0X9 1142 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 FAM35AQ86V20 835 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 UNC93AQ86WB7 457 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 KIAA1958Q8N8K9 716 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 TRIML1Q8N9V2 468 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 ECT2Q9H8V3 914 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 CYP3A43Q9HB55 503 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
COL1A1-205ENST00000476387 C2orf42Q9NWW7 574 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 TRPM5Q9NZQ8 1165 aa17.18■□□□□ 0.34
COL1A1-205ENST00000476387 PRR5-ARHGAP8B1AHC4 643 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 CLDN5O00501 218 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 HRO43593 1189 aa17.17■□□□□ 0.34
COL1A1-205ENST00000476387 LRP3O75074 770 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms