RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ZC3H12AQ5D1E8 599 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 RNF220Q5VTB9 566 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 DUPD1Q68J44 220 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PID1Q7Z2X4 250 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 MCOLN2Q8IZK6 566 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ZSCAN18Q8TBC5 510 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PDCD6IPQ8WUM4 868 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 DDX27Q96GQ7 796 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 HSD17B14Q9BPX1 270 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 KLHL8Q9P2G9 620 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ZC3H4Q9UPT8 1303 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TCRBV7S3A2A0A539 114 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM88BA6NKF7 163 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 NDC80O14777 642 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 FSCN2O14926 492 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PSMD10O75832 226 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ENDOD1O94919 500 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 STAMBPO95630 424 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 HMBSP08397 361 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TYK2P29597 1187 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 FOXN2P32314 431 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TCF7P36402 384 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ETFBP38117 255 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 NCALDP61601 193 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SKOR1P84550 965 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CUL2Q13617 745 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 KCTD2Q14681 263 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TRIP10Q15642 601 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PDCD2Q16342 344 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TDRD10Q5VZ19 366 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TATDN1Q6P1N9 297 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SPATS2Q86XZ4 545 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM192Q8IY95 271 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CNPY4Q8N129 248 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PARP8Q8N3A8 854 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ATP11CQ8NB49 1132 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 MORC4Q8TE76 937 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 LENG9Q96B70 501 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CELF6Q96J87 481 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 IWS1Q96ST2 819 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PDCD2LQ9BRP1 358 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 DCLK3Q9C098 648 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TUFT1Q9NNX1 390 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 HPS4Q9NQG7 708 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CISHQ9NSE2 258 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SPATS2LQ9NUQ6 558 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 DDX18Q9NVP1 670 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 GTSE1Q9NYZ3 720 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ADA2Q9NZK5 511 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 NKX1-2Q9UD57 310 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 LZTS1Q9Y250 596 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 A8MXQ7 604 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TOMM70O94826 608 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PGM3O95394 542 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 HSPA4LO95757 839 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PRKCBP05771 671 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 C6orf222P0C671 652 aaPredicted RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ADORA2AP29274 412 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ADSSP30520 456 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 MRPS9P82933 396 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SNAPC2Q13487 334 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CCDC142Q17RM4 750 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 AGBL2Q5U5Z8 902 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 AP1ARQ63HQ0 302 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ZDHHC24Q6UX98 284 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 FAM83AQ86UY5 434 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ECHDC2Q86YB7 292 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 FEZF2Q8TBJ5 459 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ASAP3Q8TDY4 903 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 NSUN6Q8TEA1 469 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 NAT14Q8WUY8 206 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CALR3Q96L12 384 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM120AQ9BXJ8 343 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 KIAA1586Q9HCI6 787 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TMEM8AQ9HCN3 771 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SARS2Q9NP81 518 aaKnown RBP5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PFDN4Q9NQP4 134 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 TMPRSS4Q9NRS4 437 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 RBPJLQ9UBG7 517 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 APPL1Q9UKG1 709 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 PCDHB2Q9Y5E7 798 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 REV3LO60673 3130 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF536O15090 1300 aa5.2□□□□□ -1.58
CCDC39-204ENST00000476379 SLC16A3O15427 465 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 TXNP10599 105 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MLH1P40692 756 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 GRIA1P42261 906 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 GPC3P51654 580 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CCNHP51946 323 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PKNOX1P55347 436 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ROR1Q01973 937 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PRKCZQ05513 592 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CYP24A1Q07973 514 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 NFIL3Q16649 462 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 DCAF6Q58WW2 860 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 LRIG3Q6UXM1 1119 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 UNC45BQ8IWX7 931 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ST13P5Q8NFI4 369 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CDC26Q8NHZ8 85 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms