RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 VNN1O95497 513 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ZNF806P0C7X5 589 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 IFNAR2P48551 515 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CASP4P49662 377 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 TAF10Q12962 218 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PSMD2Q13200 908 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 KCNB1Q14721 858 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SNX30Q5VWJ9 437 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 TDRD10Q5VZ19 366 aaKnown RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CACNA2D4Q7Z3S7 1137 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 KBTBD6Q86V97 674 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 B3GALNT2Q8NCR0 500 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 OR6B3Q8NGW1 331 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 EHD2Q9NZN4 543 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SLC8A2Q9UPR5 921 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CHD8Q9HCK8 2581 aa13.05□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ANTXRLA6NF34 631 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 LRRIQ3A6PVS8 624 aaPredicted RBP13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CLDN5O00501 218 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ZDHHC11BP0C7U3 371 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ANXA13P27216 316 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 AFMP43652 599 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ME1P48163 572 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 LIMK1P53667 647 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 AP3M2P53677 418 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 NR1H3Q13133 447 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CEP68Q76N32 757 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 GRAMD1CQ8IYS0 662 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 RPLP0P6Q8NHW5 317 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 USP33Q8TEY7 942 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 OVCA2Q8WZ82 227 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SYAP1Q96A49 352 aaPredicted RBP13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PAGE5Q96GU1 130 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ELOVL4Q9GZR5 314 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SDCBP2Q9H190 292 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 A8MXQ7 604 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PDXKO00764 312 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 AXIN1O15169 862 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 EXOC3O60645 756 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 NFATC1O95644 943 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CYP17A1P05093 508 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CDH8P55286 799 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 TNNC1P63316 161 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 TRPC3Q13507 836 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 DMC1Q14565 340 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 FOXD4L6Q3SYB3 417 aaPredicted RBP13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PLK5Q496M5 336 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 C1orf220Q5T0J3 134 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 FOXD4L3Q6VB84 417 aaPredicted RBP13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CRYBG2Q8N1P7 616 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 HHIPQ96QV1 700 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 DUSP15Q9H1R2 295 aaPredicted RBP13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 ARRDC1-AS1Q9H2J1 176 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 SMYD3Q9H7B4 428 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PCDHGA5Q9Y5G8 931 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 CPQQ9Y646 472 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 PI4KAP42356 2102 aa13.03□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 MAP1BP46821 2468 aaKnown RBP13.02□□□□□ -0.32
MSH5-SAPCD1-205ENST00000476085 RTN3O95197 1032 aaPredicted RBP13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 ADRB1P08588 477 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 CMA1P23946 247 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 YWHAQP27348 245 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 EIF2DP41214 584 aaKnown RBP13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 DLG4P78352 724 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 NCOA4Q13772 614 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 DHCR24Q15392 516 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 ZACNQ401N2 412 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 KMT5BQ4FZB7 885 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 RASSF3Q86WH2 238 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 FUKQ8N0W3 1084 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 ZMIZ2Q8NF64 920 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 SCAMP5Q8TAC9 235 aa13.02□□□□□ -0.33
MSH5-SAPCD1-205ENST00000476085 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms