RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 IL37Q9NZH6 218 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 TJP2Q9UDY2 1190 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 FBXW11Q9UKB1 542 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 MTCH2Q9Y6C9 303 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 TMCO5BA8MYB1 307 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 TRIM66O15016 1216 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 ARHGAP6O43182 974 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 RTN2O75298 545 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 GLUD1P00367 558 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 EPCAMP16422 314 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 ATF6P18850 670 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 ELF1P32519 619 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 CYLC1P35663 651 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-206ENST00000474648 GABRB2P47870 512 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 NRIP1P48552 1158 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 RPL10AP62906 217 aaKnown RBP10.56□□□□□ -0.72
COL8A1-206ENST00000474648 RBM10P98175 930 aaKnown RBP10.56□□□□□ -0.72
COL8A1-206ENST00000474648 HYAL1Q12794 435 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 MGAT5BQ3V5L5 792 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 PTPN20Q4JDL3 420 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 TCEAL5Q5H9L2 206 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 HABP4Q5JVS0 413 aaKnown RBP10.56□□□□□ -0.72
COL8A1-206ENST00000474648 TOGARAM2Q6ZUX3 1019 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 GPRIN1Q7Z2K8 1008 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 MCOLN2Q8IZK6 566 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 VN1R2Q8NFZ6 395 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 GPR152Q8TDT2 470 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 CPXM1Q96SM3 734 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 SEPT5Q99719 369 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-206ENST00000474648 DEF6Q9H4E7 631 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 PNPLA8Q9NP80 782 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 CYLDQ9NQC7 956 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 YIPF1Q9Y548 306 aa10.56□□□□□ -0.72
COL8A1-206ENST00000474648 NLRC5Q86WI3 1866 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 TCRBV5S1A1TA0A578 114 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 SLC38A8A6NNN8 435 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 E5RJQ4 531 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 PIK3R2O00459 728 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 PAPSS1O43252 624 aaPredicted RBP10.55□□□□□ -0.72
COL8A1-206ENST00000474648 ERBB2P04626 1255 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 MAGEA1P43355 309 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 NSFP46459 744 aaKnown RBP10.55□□□□□ -0.72
COL8A1-206ENST00000474648 GALCP54803 685 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 SLC8A3P57103 927 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 USP46P62068 366 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 MTMR3Q13615 1198 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 C2CD6Q53TS8 623 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 ZNF697Q5TEC3 545 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 PM20D1Q6GTS8 502 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 TMEM184AQ6ZMB5 413 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 MMS22LQ6ZRQ5 1243 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 CCDC149Q6ZUS6 474 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 MON1BQ7L1V2 547 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 RTL10Q7L3V2 364 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 ERICH1Q86X53 443 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 STKLD1Q8NE28 680 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 ACRBPQ8NEB7 543 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 SCAMP5Q8TAC9 235 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 FEZF2Q8TBJ5 459 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 GIPC2Q8TF65 315 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 NDRG1Q92597 394 aaKnown RBP10.55□□□□□ -0.72
COL8A1-206ENST00000474648 C18orf8Q96DM3 657 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 VCPIP1Q96JH7 1222 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 CEP295NLQ96MC4 621 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 FAM161BQ96MY7 647 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
COL8A1-206ENST00000474648 DESI2Q9BSY9 194 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 PACSIN1Q9BY11 444 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 PLEKHA4Q9H4M7 779 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 NSUN3Q9H649 340 aaKnown RBP10.55□□□□□ -0.72
COL8A1-206ENST00000474648 ADAM22Q9P0K1 906 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 CEP83Q9Y592 693 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 PCDHA13Q9Y5I0 950 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 INSL5Q9Y5Q6 135 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 USP3Q9Y6I4 520 aa10.55□□□□□ -0.72
COL8A1-206ENST00000474648 A0A0U1RQJ8 604 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 FAM92AA1XBS5 289 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 PRRG1O14668 218 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ZMYND10O75800 440 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 PAPLNO95428 1278 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 C8AP07357 584 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 LCP1P13796 627 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 HMGA1P17096 107 aaKnown RBP10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ACADSBP45954 432 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ALDH1A3P47895 512 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 TKTL1P51854 596 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 SLC5A3P53794 718 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 TWF1Q12792 350 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ADAM15Q13444 863 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 ZNF268Q14587 947 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-206ENST00000474648 C10orf76Q5T2E6 689 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 CYP4A22Q5TCH4 519 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 PPP1R2P3Q6NXS1 205 aa10.54□□□□□ -0.72
COL8A1-206ENST00000474648 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms