RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MRFAP1Q9Y605 127 aa21.44■■□□□ 1.02
CDHR3-210ENST00000474330 GOLGA8SH3BPF8 625 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 H7C4K7 107 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 TBC1D4O60343 1298 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 GJB6O95452 261 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 MAP3K7CLP57077 242 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 ERVK-21P61565 698 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 RPS6KA1Q15418 735 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 USP41Q3LFD5 358 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 OR6B2Q6IFH4 312 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 FAM183BPQ6ZVS7 135 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 ZMIZ2Q8NF64 920 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 HES6Q96HZ4 224 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 B3GALT6Q96L58 329 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 MCEEQ96PE7 176 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 GAS2L1Q99501 681 aaPredicted RBP21.43■■□□□ 1.02
CDHR3-210ENST00000474330 IP6K2Q9UHH9 426 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 PACSIN2Q9UNF0 486 aaPredicted RBP21.43■■□□□ 1.02
CDHR3-210ENST00000474330 HYOU1Q9Y4L1 999 aa21.43■■□□□ 1.02
CDHR3-210ENST00000474330 COL4A4P53420 1690 aaPredicted RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 TMEM110-MUSTN1A8MSY1 372 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 PIK3R2O00459 728 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 PAPSS1O43252 624 aaPredicted RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 LPXNO60711 386 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 PROSCO94903 275 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 OR4Q2P0C623 313 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 TCP1P17987 556 aaKnown RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 COMTP21964 271 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 SLC1A1P43005 524 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 NFE2Q16621 373 aaPredicted RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 OLFML1Q6UWY5 402 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 SPATA2LQ8IUW3 424 aaPredicted RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 FNIP1Q8TF40 1166 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 CLP1Q92989 425 aaKnown RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 TMEM169Q96HH4 297 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 VN1R3Q9BXE9 311 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 METTL5Q9NRN9 209 aaKnown RBP21.42■■□□□ 1.02
CDHR3-210ENST00000474330 CHST7Q9NS84 486 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 SPG21Q9NZD8 308 aa21.42■■□□□ 1.02
CDHR3-210ENST00000474330 BDNFP23560 247 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 RFC1P35251 1148 aaPredicted RBP21.41■■□□□ 1.02
CDHR3-210ENST00000474330 PPM1AP35813 382 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 SCNN1AP37088 669 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 CACNA2D1P54289 1103 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 SLC6A3Q01959 620 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 SLC39A12Q504Y0 691 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 FAM102AQ5T9C2 384 aaPredicted RBP21.41■■□□□ 1.02
CDHR3-210ENST00000474330 SCUBE3Q8IX30 993 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 FUBP3Q96I24 572 aaKnown RBP eCLIP21.41■■□□□ 1.02
CDHR3-210ENST00000474330 OSBPL9Q96SU4 736 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 KCNK16Q96T55 309 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 C17orf80Q9BSJ5 609 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 TMEM30AQ9NV96 361 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 PCDHB12Q9Y5F1 795 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 PLXNA4Q9HCM2 1894 aa21.41■■□□□ 1.02
CDHR3-210ENST00000474330 PRRC2BQ5JSZ5 2229 aaKnown RBP21.41■■□□□ 1.02
CDHR3-210ENST00000474330 MIF4GDA9UHW6 222 aaKnown RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 SOD2P04179 222 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 LINC00271P0C7V0 271 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 POU3F3P20264 500 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 MAN1A1P33908 653 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 CDR1P51861 262 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 PTPROQ16827 1216 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 CFAP221Q4G0U5 840 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 JOSD2Q8TAC2 188 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 TGS1Q96RS0 853 aaKnown RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 LRRC4Q9HBW1 653 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 TMEM59LQ9UK28 342 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 MTUS1Q9ULD2 1270 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 HHLA1C9JL84 531 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 RIOK3O14730 519 aaKnown RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 SRGAP2O75044 1071 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 LCP1P13796 627 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 IGFBP4P22692 258 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 OGDHQ02218 1023 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 ZNF252P-AS1Q0IIN9 211 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 SMARCB1Q12824 385 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 PIGHQ14442 188 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 RAB41Q5JT25 222 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 NIPA2Q8N8Q9 360 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 PIK3R5Q8WYR1 880 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 CD101Q93033 1021 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 RHOBTB2Q9BYZ6 727 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 PNPLA8Q9NP80 782 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 DMAP1Q9NPF5 467 aaPredicted RBP21.4■■□□□ 1.02
CDHR3-210ENST00000474330 MTRRQ9UBK8 725 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 BACE2Q9Y5Z0 518 aa21.4■■□□□ 1.02
CDHR3-210ENST00000474330 DDX3YO15523 660 aaKnown RBP21.39■■□□□ 1.01
CDHR3-210ENST00000474330 SPOPO43791 374 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 GPR17Q13304 367 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 WHAMMP3Q1A5X7 153 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 SLC26A9Q7LBE3 791 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 ARCQ7LC44 396 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 DDX53Q86TM3 631 aaKnown RBP21.39■■□□□ 1.01
CDHR3-210ENST00000474330 KHSRPQ92945 711 aaKnown RBP eCLIP21.39■■□□□ 1.01
CDHR3-210ENST00000474330 PIWIL1Q96J94 861 aaKnown RBP21.39■■□□□ 1.01
CDHR3-210ENST00000474330 HERC2P3Q9BVR0 1158 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 RWDD3Q9Y3V2 267 aa21.39■■□□□ 1.01
CDHR3-210ENST00000474330 MTCH2Q9Y6C9 303 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms