RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 BOCQ9BWV1 1114 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 CRNKL1Q9BZJ0 848 aaKnown RBP2.75□□□□□ -1.97
VPS45-206ENST00000472756 KRT23Q9C075 422 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 COA1Q9GZY4 146 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 CPVLQ9H3G5 476 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 ZSCAN16Q9H4T2 348 aaPredicted RBP2.75□□□□□ -1.97
VPS45-206ENST00000472756 PCIF1Q9H4Z3 704 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 DNAJC18Q9H819 358 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 DBNDD1Q9H9R9 158 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 ATP8A2Q9NTI2 1148 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 TCP11L1Q9NUJ3 509 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 MCM9Q9NXL9 1143 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 PGAP2Q9UHJ9 254 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 SAP30BPQ9UHR5 308 aaKnown RBP2.75□□□□□ -1.97
VPS45-206ENST00000472756 MAD2L2Q9UI95 211 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 NAP1L2Q9ULW6 460 aaPredicted RBP2.75□□□□□ -1.97
VPS45-206ENST00000472756 PCDHA7Q9UN72 937 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 CLCA2Q9UQC9 943 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 MYH7P12883 1935 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 TCHHQ07283 1943 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 SLX4Q8IY92 1834 aa2.75□□□□□ -1.97
VPS45-206ENST00000472756 ROBO3Q96MS0 1386 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 FLT1P17948 1338 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 STK36Q9NRP7 1315 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 KIAA1551Q9HCM1 1747 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 MYH13Q9UKX3 1938 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 A0A087X0B3 334 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SHTN1A0MZ66 631 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 DDTLA6NHG4 134 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 CCDC69A6NI79 296 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 H3BQV1 296 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 PLD2O14939 933 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 NPHP1O15259 732 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 IGSF3O75054 1194 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 NTN1O95631 604 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 MMP1P03956 469 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 HLA-DOAP06340 250 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 LDHCP07864 332 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 GOLGA8HP0CJ92 632 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SNHG28P0DPA3 235 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 AKR1B1P15121 316 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 MARCKSP29966 332 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 ALDH1B1P30837 517 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SHMT1P34896 483 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 FLT3P36888 993 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 CASRP41180 1078 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 IARSP41252 1262 aaKnown RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 NDUFA8P51970 172 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 RCAN1P53805 252 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 CACNB3P54284 484 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 KRT85P78386 507 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TFAP4Q01664 338 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TRDNQ13061 729 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 GRM4Q14833 912 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SLC39A14Q15043 492 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 IQCB1Q15051 598 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 ZNF174Q15697 407 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 CAMK4Q16566 473 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 MAN2A1Q16706 1144 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 FNDC3BQ53EP0 1204 aaKnown RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 CCDC183Q5T5S1 534 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 L1TD1Q5T7N2 865 aaKnown RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 PIK3R6Q5UE93 754 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 ANO1Q5XXA6 986 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 RUSC1-AS1Q66K80 236 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TMED8Q6PL24 325 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 C16orf86Q6ZW13 317 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TMTC3Q6ZXV5 915 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 DZIP1Q86YF9 867 aaKnown RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 CCAR1Q8IX12 1150 aaKnown RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 TEX11Q8IYF3 940 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 UNC5BQ8IZJ1 945 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SYNPOQ8N3V7 929 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 C4orf32Q8N8J7 132 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 FAM184AQ8NB25 1140 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 NUP133Q8WUM0 1156 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 ESR2Q92731 530 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 ZNF622Q969S3 477 aaKnown RBP eCLIP2.74□□□□□ -1.971e-6■■■■□ 25.6
VPS45-206ENST00000472756 ZBED3Q96IU2 234 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 C8orf76Q96K31 380 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 PRMT6Q96LA8 375 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 MED15Q96RN5 788 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TIMP4Q99727 224 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TMEM47Q9BQJ4 181 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 WACQ9BTA9 647 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SLC26A6Q9BXS9 759 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 RNF26Q9BY78 433 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 NACAP1Q9BZK3 213 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 CLSTN2Q9H4D0 955 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 RNF41Q9H4P4 317 aaPredicted RBP2.74□□□□□ -1.97
VPS45-206ENST00000472756 ZSWIM4Q9H7M6 989 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 KIAA1586Q9HCI6 787 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 TOMM22Q9NS69 142 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 STK32BQ9NY57 414 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 MTMR4Q9NYA4 1195 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 DACT1Q9NYF0 836 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 VPS54Q9P1Q0 977 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 SLC17A6Q9P2U8 582 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 HPSEQ9Y251 543 aa2.74□□□□□ -1.97
VPS45-206ENST00000472756 PCDHB6Q9Y5E3 794 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms