RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 NAGPAQ9UK23 515 aa16.94■□□□□ 0.3
PCOLCE-205ENST00000472348 INTUQ9ULD6 942 aa16.94■□□□□ 0.3
PCOLCE-205ENST00000472348 STRIP2Q9ULQ0 834 aa16.94■□□□□ 0.3
PCOLCE-205ENST00000472348 PCDHGC5Q9Y5F6 944 aa16.94■□□□□ 0.3
PCOLCE-205ENST00000472348 EIF3CLB5ME19 914 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 DDX3XO00571 662 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 ARHGAP6O43182 974 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 XYLBO75191 536 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 GLI1P08151 1106 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 SKILP12757 684 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 ATF6P18850 670 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 EIF4A3P38919 411 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 NSFP46459 744 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 PSEN1P49768 467 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 KIF11P52732 1056 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 EPHA5P54756 1037 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 MAP3K7CLP57077 242 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 PDCLQ13371 301 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 PPM1LQ5SGD2 360 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 DENND1BQ6P3S1 775 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 ELMOD1Q8N336 334 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 PDZD8Q8NEN9 1154 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 SLC7A14Q8TBB6 771 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 KCNK16Q96T55 309 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 EIF3CQ99613 913 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 LPIN3Q9BQK8 851 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 TRIM62Q9BVG3 475 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 PRKD2Q9BZL6 878 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 TMEM30AQ9NV96 361 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 ASNSD1Q9NWL6 643 aa16.93■□□□□ 0.3
PCOLCE-205ENST00000472348 A0A087X0T9 212 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 AKR1B10O60218 316 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 BEST1O76090 585 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 CALB1P05937 261 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 FAM228BP0C875 321 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 MYBL1P10243 752 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 EPCAMP16422 314 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 PFKLP17858 780 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 ITIH3Q06033 890 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 ZNF268Q14587 947 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 PABPC1LQ4VXU2 614 aaKnown RBP16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 TAF3Q5VWG9 929 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 SNX30Q5VWJ9 437 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 PMF1Q6P1K2 205 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 ALKBH5Q6P6C2 394 aaKnown RBP16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 ERICH1Q86X53 443 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 TXLNBQ8N3L3 684 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 UBA3Q8TBC4 463 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 PPM1EQ8WY54 764 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 PPP1R13BQ96KQ4 1090 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 PCDHB18PQ96TA0 734 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 SEPT5Q99719 369 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 LRRC4Q9HBW1 653 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 SLC27A5Q9Y2P5 690 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 EPN1Q9Y6I3 576 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 OBSL1O75147 1896 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 CLUHO75153 1309 aa16.92■□□□□ 0.3
PCOLCE-205ENST00000472348 MYO16Q9Y6X6 1858 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 PER2O15055 1255 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 PLEKP08567 350 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 CFHP08603 1231 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 SLC5A3P53794 718 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 CACNA2D1P54289 1103 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 RBM23Q86U06 439 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 SCN4BQ8IWT1 228 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 ARHGAP18Q8N392 663 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 C18orf8Q96DM3 657 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 CALR3Q96L12 384 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 ZNF512Q96ME7 567 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 SCML2Q9UQR0 700 aa16.91■□□□□ 0.3
PCOLCE-205ENST00000472348 ANAPC1Q9H1A4 1944 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 COL6A3P12111 3177 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 ANKRD62A6NC57 917 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 SLC38A8A6NNN8 435 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 NDUFA10O95299 355 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 IPO7O95373 1038 aaKnown RBP16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 GLP2RO95838 553 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 PTPN2P17706 415 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 KRT83P78385 493 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 TWF1Q12792 350 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 TCEAL1Q15170 157 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 CCDC85BQ15834 202 aaPredicted RBP16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 DDR2Q16832 855 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 MON1BQ7L1V2 547 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 DNAJB7Q7Z6W7 309 aaPredicted RBP16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 TTC9BQ8N6N2 239 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 VN1R2Q8NFZ6 395 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 CPXM1Q96SM3 734 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
PCOLCE-205ENST00000472348 C2orf16Q68DN1 1984 aa16.89■□□□□ 0.3
PCOLCE-205ENST00000472348 CALCAP01258 141 aa16.89■□□□□ 0.29
PCOLCE-205ENST00000472348 ZDHHC11BP0C7U3 371 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms