RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TMCO5BA8MYB1 307 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 DDX3XO00571 662 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCM2-205ENST00000472223 SART1O43290 800 aaKnown RBP17.76■□□□□ 0.43
CCM2-205ENST00000472223 FBXO21O94952 628 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 FGF19O95750 216 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 CFHP08603 1231 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 LCP1P13796 627 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 YWHAQP27348 245 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 TKTL1P51854 596 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 CENPCQ03188 943 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 ADAM15Q13444 863 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 CYP4A22Q5TCH4 519 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 SDHAF4Q5VUM1 108 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 CES5AQ6NT32 575 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 PMF1Q6P1K2 205 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 ALKBH5Q6P6C2 394 aaKnown RBP17.76■□□□□ 0.43
CCM2-205ENST00000472223 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 ZDHHC17Q8IUH5 632 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 C18orf8Q96DM3 657 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 ADAM22Q9P0K1 906 aa17.76■□□□□ 0.43
CCM2-205ENST00000472223 EPN1Q9Y6I3 576 aaPredicted RBP17.76■□□□□ 0.43
CCM2-205ENST00000472223 CCL16O15467 120 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 FTLP02792 175 aaPredicted RBP17.75■□□□□ 0.43
CCM2-205ENST00000472223 UNGP13051 313 aaPredicted RBP17.75■□□□□ 0.43
CCM2-205ENST00000472223 PTPN2P17706 415 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 GTF2F1P35269 517 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCM2-205ENST00000472223 GPR15P49685 360 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 SLC5A3P53794 718 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 CACNA2D1P54289 1103 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 KRT83P78385 493 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 GFPT1Q06210 699 aaPredicted RBP17.75■□□□□ 0.43
CCM2-205ENST00000472223 PABPC1LQ4VXU2 614 aaKnown RBP17.75■□□□□ 0.43
CCM2-205ENST00000472223 DNAJB7Q7Z6W7 309 aaPredicted RBP17.75■□□□□ 0.43
CCM2-205ENST00000472223 ARHGAP18Q8N392 663 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 LEMD2Q8NC56 503 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 PDZD8Q8NEN9 1154 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 ZMIZ2Q8NF64 920 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 SLC30A5Q8TAD4 765 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 GPR152Q8TDT2 470 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 PSMG2Q969U7 264 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 VCPIP1Q96JH7 1222 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 PCDHB18PQ96TA0 734 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 SYT11Q9BT88 431 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 TRIM62Q9BVG3 475 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 SLC4A5Q9BY07 1137 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 PRKD2Q9BZL6 878 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 CNGB3Q9NQW8 809 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 WDR35Q9P2L0 1181 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 NAGPAQ9UK23 515 aa17.75■□□□□ 0.43
CCM2-205ENST00000472223 A0A087X0T9 212 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 ARHGAP6O43182 974 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 FAM228BP0C875 321 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 MYBL1P10243 752 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 ATF6P18850 670 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 FECHP22830 423 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 PPP3CCP48454 512 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
CCM2-205ENST00000472223 ADIGQ0VDE8 80 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 OR6B2Q6IFH4 312 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 ANKRD54Q6NXT1 300 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 TOGARAM2Q6ZUX3 1019 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 TMEM110Q86TL2 294 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 PHF13Q86YI8 300 aaPredicted RBP17.74■□□□□ 0.43
CCM2-205ENST00000472223 WDTC1Q8N5D0 677 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 CMASQ8NFW8 434 aaPredicted RBP17.74■□□□□ 0.43
CCM2-205ENST00000472223 SMG7Q92540 1137 aaKnown RBP17.74■□□□□ 0.43
CCM2-205ENST00000472223 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 PABPC5Q96DU9 382 aaKnown RBP17.74■□□□□ 0.43
CCM2-205ENST00000472223 ASAH2Q9NR71 780 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 MTMR10Q9NXD2 777 aa17.74■□□□□ 0.43
CCM2-205ENST00000472223 PRRC2BQ5JSZ5 2229 aaKnown RBP17.74■□□□□ 0.43
CCM2-205ENST00000472223 ANKRD62A6NC57 917 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 SOWAHDA6NJG2 315 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 EIF3CLB5ME19 914 aaKnown RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 E5RJQ4 531 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 TULP2O00295 520 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 ZNF197O14709 1029 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 RFPL2O75678 378 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 NDUFA10O95299 355 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 ZBED1O96006 694 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 POU2F2P09086 479 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 MMP8P22894 467 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 ITIH3Q06033 890 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 CCDC85BQ15834 202 aaPredicted RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 RAB41Q5JT25 222 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 EFHC1Q5JVL4 640 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 RARS2Q5T160 578 aaKnown RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 MMS22LQ6ZRQ5 1243 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 PDZD4Q76G19 769 aaPredicted RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 STKLD1Q8NE28 680 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 CTNNBL1Q8WYA6 563 aaPredicted RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 IRGQQ8WZA9 623 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 TRIM44Q96DX7 344 aaPredicted RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 TRMT2BQ96GJ1 504 aaKnown RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 CPXM1Q96SM3 734 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 EIF3CQ99613 913 aaKnown RBP17.73■□□□□ 0.43
CCM2-205ENST00000472223 CORO1BQ9BR76 489 aa17.73■□□□□ 0.43
CCM2-205ENST00000472223 C11orf70Q9BRQ4 267 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms