RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 ZDHHC17Q8IUH5 632 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 C12orf29Q8N999 325 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 HSPH1Q92598 858 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 PEBP4Q96S96 227 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 OSMRQ99650 979 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 PRMT1Q99873 361 aaKnown RBP19.48■□□□□ 0.71
COL20A1-205ENST00000471582 NCAPGQ9BPX3 1015 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 MRPL45Q9BRJ2 306 aaKnown RBP19.48■□□□□ 0.71
COL20A1-205ENST00000471582 CTNNAL1Q9UBT7 734 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 TUBGCP4Q9UGJ1 667 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 UBQLN1Q9UMX0 589 aaKnown RBP19.48■□□□□ 0.71
COL20A1-205ENST00000471582 GINS2Q9Y248 185 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 TRIP11Q15643 1979 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 SCN1AP35498 2009 aa19.48■□□□□ 0.71
COL20A1-205ENST00000471582 TMEM120BA0PK00 339 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 MCF2LO15068 1137 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CPP00450 1065 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 ADAM17P78536 824 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 TMEM62Q0P6H9 643 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 MFSD10Q14728 455 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 RASA2Q15283 850 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 SESTD1Q86VW0 696 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 REM2Q8IYK8 340 aaPredicted RBP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 TEKT4Q8WW24 435 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 RSAD2Q8WXG1 361 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 P3H4Q92791 437 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CABS1Q96KC9 395 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CALN1Q9BXU9 219 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CDHR5Q9HBB8 845 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 SAE1Q9UBE0 346 aaPredicted RBP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 HESX1Q9UBX0 185 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 NAALADL1Q9UQQ1 740 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 PDCD11Q14690 1871 aaKnown RBP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 PRPSAP2O60256 369 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CAPN15O75808 1086 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 RECQL4O94761 1208 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CD4P01730 458 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 DESP17661 470 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CTCFP49711 727 aaPredicted RBP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 PDK2Q15119 407 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 TAF5Q15542 800 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 C9orf57Q5W0N0 161 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 ACOT1Q86TX2 421 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 TTC30AQ86WT1 665 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 SLC35F5Q8WV83 523 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 TBCBQ99426 244 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 TRIM6Q9C030 488 aaPredicted RBP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 NSRP1Q9H0G5 558 aaKnown RBP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 CXCL16Q9H2A7 254 aa19.47■□□□□ 0.71
COL20A1-205ENST00000471582 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.47■□□□□ 0.71
COL20A1-205ENST00000471582 EXOC1LA0A1B0GW35 172 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 HAS3O00219 553 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 PPEF2O14830 753 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 GDF10P55107 478 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 EIF3EP60228 445 aaKnown RBP19.46■□□□□ 0.71
COL20A1-205ENST00000471582 SLC6A3Q01959 620 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 IFT88Q13099 833 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 NOMO1Q15155 1222 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 HIF1AQ16665 826 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 DEFB115Q30KQ5 88 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 BOLA3Q53S33 107 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 PMF1Q6P1K2 205 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 MAP7D3Q8IWC1 876 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 PIWIL1Q96J94 861 aaKnown RBP19.46■□□□□ 0.71
COL20A1-205ENST00000471582 MAK16Q9BXY0 300 aaKnown RBP19.46■□□□□ 0.71
COL20A1-205ENST00000471582 CREBZFQ9NS37 354 aa19.46■□□□□ 0.71
COL20A1-205ENST00000471582 XPOTO43592 962 aaKnown RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 BRAFP15056 766 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 STIP1P31948 543 aaKnown RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 RPL22P35268 128 aaKnown RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 CDH6P55285 790 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 FCGRTP55899 365 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 DPYSL3Q14195 570 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 CCDC14Q49A88 953 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 PIGWQ7Z7B1 504 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 CYP4X1Q8N118 509 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 NAT8LQ8N9F0 302 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 CPT1BQ92523 772 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 MAML1Q92585 1016 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 C18orf25Q96B23 403 aaPredicted RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 CAPNS2Q96L46 248 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 KATNAL1Q9BW62 490 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 NXF3Q9H4D5 531 aaKnown RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 UBN1Q9NPG3 1134 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 FETUBQ9UGM5 382 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 PIRO00625 290 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 FSBPO95073 299 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 IGHA2P01877 340 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 RBP3P10745 1247 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 SDC4P31431 198 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 SCNN1AP37088 669 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 PNPLA4P41247 253 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 PSMC4P43686 418 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 ARL4CP56559 192 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 SOWAHAQ2M3V2 549 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 C15orf59Q2T9L4 293 aaPredicted RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 XKR4Q5GH76 650 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 FBXO47Q5MNV8 452 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 SH3PXD2AQ5TCZ1 1133 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 ZBED8Q8IZ13 594 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms