RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 CDH8P55286 799 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 TRIM14Q14142 442 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 SGSM1Q2NKQ1 1148 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 MIIPQ5JXC2 388 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-209ENST00000470799 TMEM150AQ86TG1 271 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 MON1AQ86VX9 555 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 ZSCAN30Q86W11 494 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 TRIM59Q8IWR1 403 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 FAM186BQ8IYM0 893 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 ELMO3Q96BJ8 720 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 IQCDQ96DY2 449 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 EEF2KMTQ96G04 330 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 TRMT2BQ96GJ1 504 aaKnown RBP17.01■□□□□ 0.31
COL16A1-209ENST00000470799 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 XYLT2Q9H1B5 865 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 NDST4Q9H3R1 872 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 DPEP3Q9H4B8 488 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 C8orf33Q9H7E9 229 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-209ENST00000470799 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL16A1-209ENST00000470799 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 EHD2Q9NZN4 543 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 ARMCX3Q9UH62 379 aaPredicted RBP17.01■□□□□ 0.31
COL16A1-209ENST00000470799 CACNA1HO95180 2353 aa17.01■□□□□ 0.31
COL16A1-209ENST00000470799 TRAV19A0A0A6YYK7 116 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 MAPK13O15264 365 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 ABL1P00519 1130 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 CKMP06732 381 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 WEE1P30291 646 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 SOX9P48436 509 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 CLDN10P78369 228 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
COL16A1-209ENST00000470799 IFRD2Q12894 506 aaPredicted RBP17■□□□□ 0.31
COL16A1-209ENST00000470799 ZC3H14Q6PJT7 736 aaKnown RBP17■□□□□ 0.31
COL16A1-209ENST00000470799 INTS8Q75QN2 995 aaKnown RBP17■□□□□ 0.31
COL16A1-209ENST00000470799 SV2AQ7L0J3 742 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 LRRC8AQ8IWT6 810 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 B3GALNT2Q8NCR0 500 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 TNIP3Q96KP6 325 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 SPATA17Q96L03 361 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 MYRFLQ96LU7 910 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 ERGIC2Q96RQ1 377 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 NUP58Q9BVL2 599 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 IMPG2Q9BZV3 1241 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 ELOVL4Q9GZR5 314 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 GKN1Q9NS71 199 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 GTSE1Q9NYZ3 720 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
COL16A1-209ENST00000470799 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 F8VP50 259 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 CLDN5O00501 218 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 NRDCO43847 1150 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 AKAP3O75969 853 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 VNN1O95497 513 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 TPM1P09493 284 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 USP17L7P0C7H9 530 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 SP9P0CG40 484 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 TRIM21P19474 475 aaKnown RBP16.99■□□□□ 0.31
COL16A1-209ENST00000470799 GCLMP48507 274 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 TNK2Q07912 1038 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 ZACNQ401N2 412 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-209ENST00000470799 CLDN23Q96B33 292 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 MSANTD3Q96H12 275 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 KIF9Q9HAQ2 790 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 TRPM5Q9NZQ8 1165 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 CCL26Q9Y258 94 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL16A1-209ENST00000470799 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL16A1-209ENST00000470799 R4GN57 208 aa16.99■□□□□ 0.31
COL16A1-209ENST00000470799 COL4A3Q01955 1670 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 SOBPA7XYQ1 873 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 PROB1E7EW31 1015 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 SPECC1L-ADORA2AF8WAN1 911 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 ARNTLO00327 626 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 PES1O00541 588 aaKnown RBP16.98■□□□□ 0.31
COL16A1-209ENST00000470799 HLA-DRAP01903 254 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 TRIM49P0CI25 452 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 TRIM49CP0CI26 452 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 RPS9P46781 194 aaKnown RBP16.98■□□□□ 0.31
COL16A1-209ENST00000470799 MCCD1P59942 119 aaPredicted RBP16.98■□□□□ 0.31
COL16A1-209ENST00000470799 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 ASCL5Q7RTU5 278 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 TAF4BQ92750 862 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 CEP295NLQ96MC4 621 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 CYP2S1Q96SQ9 504 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 B3GNT5Q9BYG0 378 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 ZNF518BQ9C0D4 1074 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 NME7Q9Y5B8 376 aa16.98■□□□□ 0.31
COL16A1-209ENST00000470799 TADA3O75528 432 aa16.97■□□□□ 0.31
COL16A1-209ENST00000470799 HDCP19113 662 aa16.97■□□□□ 0.31
COL16A1-209ENST00000470799 PDE6CP51160 858 aa16.97■□□□□ 0.31
COL16A1-209ENST00000470799 MLLT6P55198 1093 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-209ENST00000470799 MTAPQ13126 283 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms