RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 RETP07949 1114 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 HOXC13P31276 330 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 RAP1GAPP47736 663 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 SRSF5Q13243 272 aaKnown RBP33.3■■■□□ 2.92
HMG20B-209ENST00000470356 NAIF1Q69YI7 327 aaPredicted RBP33.3■■■□□ 2.92
HMG20B-209ENST00000470356 NUP93Q8N1F7 819 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 CCDC47Q96A33 483 aaKnown RBP33.3■■■□□ 2.92
HMG20B-209ENST00000470356 SCAND2PQ9GZW5 306 aaPredicted RBP33.3■■■□□ 2.92
HMG20B-209ENST00000470356 TRAF3IP3Q9Y228 551 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 FRMD4BQ9Y2L6 1034 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 ATP6V1DQ9Y5K8 247 aa33.3■■■□□ 2.92
HMG20B-209ENST00000470356 ATP8B3O60423 1300 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 LEFTY2O00292 366 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 CALUO43852 315 aaPredicted RBP33.29■■■□□ 2.92
HMG20B-209ENST00000470356 RNF40O75150 1001 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 RHOBTB3O94955 611 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 CLSTN1O94985 981 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 P4HA1P13674 534 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 RSPO4Q2I0M5 234 aaPredicted RBP33.29■■■□□ 2.92
HMG20B-209ENST00000470356 DGLUCYQ7Z3D6 616 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 TAF4BQ92750 862 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 CD101Q93033 1021 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 SDCBP2Q9H190 292 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 PARD6AQ9NPB6 346 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 MYH10P35580 1976 aa33.29■■■□□ 2.92
HMG20B-209ENST00000470356 CCDC163A0A0D9SF12 145 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 RTN3O95197 1032 aaPredicted RBP33.28■■■□□ 2.92
HMG20B-209ENST00000470356 ABL1P00519 1130 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 OAS1P00973 400 aaKnown RBP33.28■■■□□ 2.92
HMG20B-209ENST00000470356 YWHAQP27348 245 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 LMNB2Q03252 620 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 DPYDQ12882 1025 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 CEP135Q66GS9 1140 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 SCARA5Q6ZMJ2 495 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 SV2AQ7L0J3 742 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 ELMO3Q96BJ8 720 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 USP18Q9UMW8 372 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 SLC8A2Q9UPR5 921 aa33.28■■■□□ 2.92
HMG20B-209ENST00000470356 DNAH14Q0VDD8 3507 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 A0A1W2PQ27 194 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 A0A1W2PQ64 194 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 A0A1W2PQD8 194 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 PRR5-ARHGAP8B1AHC4 643 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 MAPK13O15264 365 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 LRP3O75074 770 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 NFATC1O95644 943 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 PRR29P0C7W0 189 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 SDHBP21912 280 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 ARHGAP8P85298 464 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 PAQR9Q6ZVX9 377 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 FAM35AQ86V20 835 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 KCNK16Q96T55 309 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 MED10Q9BTT4 135 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 NCOR2Q9Y618 2525 aa33.27■■■□□ 2.92
HMG20B-209ENST00000470356 SPEM2Q0P670 501 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 NFIL3Q16649 462 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 C1orf220Q5T0J3 134 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 PDZD8Q8NEN9 1154 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 OVCA2Q8WZ82 227 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 EZH1Q92800 747 aaPredicted RBP33.26■■■□□ 2.91
HMG20B-209ENST00000470356 CPQQ9Y646 472 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 MYO16Q9Y6X6 1858 aa33.26■■■□□ 2.91
HMG20B-209ENST00000470356 MYOFQ9NZM1 2061 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 ASS1P00966 412 aaKnown RBP33.25■■■□□ 2.91
HMG20B-209ENST00000470356 IFRD2Q12894 506 aaPredicted RBP33.25■■■□□ 2.91
HMG20B-209ENST00000470356 KRBA2Q6ZNG9 492 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 CEP68Q76N32 757 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 ACOT1Q86TX2 421 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 CAMKK1Q8N5S9 505 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 SMARCD1Q96GM5 515 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 DMAP1Q9NPF5 467 aaPredicted RBP33.25■■■□□ 2.91
HMG20B-209ENST00000470356 IL37Q9NZH6 218 aa33.25■■■□□ 2.91
HMG20B-209ENST00000470356 TNFRSF10BO14763 440 aa33.24■■■□□ 2.91
HMG20B-209ENST00000470356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP33.24■■■□□ 2.91
HMG20B-209ENST00000470356 ADGRG2Q8IZP9 1017 aa33.24■■■□□ 2.91
HMG20B-209ENST00000470356 FUKQ8N0W3 1084 aa33.24■■■□□ 2.91
HMG20B-209ENST00000470356 CRYBG2Q8N1P7 616 aa33.24■■■□□ 2.91
HMG20B-209ENST00000470356 FBXO32Q969P5 355 aa33.24■■■□□ 2.91
HMG20B-209ENST00000470356 SMPD4Q9NXE4 827 aa33.24■■■□□ 2.91
HMG20B-209ENST00000470356 KIAA1549LQ6ZVL6 1849 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 SLC9A3R1O14745 358 aaPredicted RBP33.23■■■□□ 2.91
HMG20B-209ENST00000470356 NR2F2P24468 414 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 PXNP49023 591 aaPredicted RBP33.23■■■□□ 2.91
HMG20B-209ENST00000470356 VAMP7P51809 220 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 FILIP1Q7Z7B0 1213 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 UNC93AQ86WB7 457 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 GUF1Q8N442 669 aaKnown RBP33.23■■■□□ 2.91
HMG20B-209ENST00000470356 FAM160A2Q8N612 972 aaPredicted RBP33.23■■■□□ 2.91
HMG20B-209ENST00000470356 SCAMP5Q8TAC9 235 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 GAB3Q8WWW8 586 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 COMMD8Q9NX08 183 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 EML5Q05BV3 1969 aa33.23■■■□□ 2.91
HMG20B-209ENST00000470356 HLA-DRAP01903 254 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 NDST1P52848 882 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 SNX30Q5VWJ9 437 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 SYT13Q7L8C5 426 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 DDX42Q86XP3 938 aaKnown RBP eCLIP33.22■■■□□ 2.91
HMG20B-209ENST00000470356 RPLP0P6Q8NHW5 317 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 CCDC26Q8TAB7 109 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 GOLPH3LQ9H4A5 285 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms