RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CASKIN2Q8WXE0 1202 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 IFT81Q8WYA0 676 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 RAPGEF5Q92565 580 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 TOX2Q96NM4 488 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 ACBD6Q9BR61 282 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 ATP11BQ9Y2G3 1177 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 MICAL3Q7RTP6 2002 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 ARHGEF37A1IGU5 675 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 AP1G2O75843 785 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 TNFRSF8P28908 595 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 CARSP49589 748 aaKnown RBP19.02■□□□□ 0.64
SMC4-211ENST00000469858 ATP11AP98196 1134 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 TRADDQ15628 312 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 INTS6LQ5JSJ4 861 aaKnown RBP19.02■□□□□ 0.64
SMC4-211ENST00000469858 TTC27Q6P3X3 843 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 CCDC137Q6PK04 289 aaKnown RBP19.02■□□□□ 0.64
SMC4-211ENST00000469858 SLC26A9Q7LBE3 791 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 C1orf54Q8WWF1 131 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 MYLPFQ96A32 169 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 TRIM51Q9BSJ1 452 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.02■□□□□ 0.64
SMC4-211ENST00000469858 USP18Q9UMW8 372 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 DPYSL4O14531 572 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 CXCL10P02778 98 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 KRT10P13645 584 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 SDC4P31431 198 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 RABGGTBP53611 331 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 KLF1Q13351 362 aaPredicted RBP19.02■□□□□ 0.64
SMC4-211ENST00000469858 DHX34Q14147 1143 aaKnown RBP19.02■□□□□ 0.64
SMC4-211ENST00000469858 CCDC14Q49A88 953 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 RAB6CQ53S08 254 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 KAZNQ674X7 775 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 SPOCD1Q6ZMY3 1216 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 THEM5Q8N1Q8 247 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 OR10T2Q8NGX3 314 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 GDAP1L1Q96MZ0 367 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 FUT8Q9BYC5 575 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 RAB6CQ9H0N0 254 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 LRRC4Q9HBW1 653 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 PCDHB8Q9UN66 801 aa19.02■□□□□ 0.64
SMC4-211ENST00000469858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 TMEM189-UBE2V1I3L0A0 370 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 SASH3O75995 380 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 TYMPP19971 482 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 TNNT3P45378 269 aaPredicted RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 YWHAHQ04917 246 aaPredicted RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 C12orf50Q8NA57 414 aaPredicted RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 ATG4AQ8WYN0 398 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 CASD1Q96PB1 797 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 TMEM209Q96SK2 561 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 SMOQ99835 787 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 RHOBTB2Q9BYZ6 727 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 NGRNQ9NPE2 291 aaKnown RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 NFU1Q9UMS0 254 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 UTP11Q9Y3A2 253 aaKnown RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 PTPRDP23468 1912 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 CAPN15O75808 1086 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 PARNO95453 639 aaKnown RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 PCK1P35558 622 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 SCNN1AP37088 669 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 COILP38432 576 aaPredicted RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 KCNJ1P48048 391 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 CACNA2D1P54289 1103 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 C1QTNF8P60827 252 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 SNX1Q13596 522 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 C1orf53Q5VUE5 145 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 JAMLQ86YT9 394 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 CCDC105Q8IYK2 499 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 SIX6OS1Q8N1H7 587 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 AENQ8WTP8 325 aaKnown RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 KCTD13Q8WZ19 329 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 NDRG1Q92597 394 aaKnown RBP19.01■□□□□ 0.63
SMC4-211ENST00000469858 HSPH1Q92598 858 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 SMARCD1Q96GM5 515 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 PEBP4Q96S96 227 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 KCNK16Q96T55 309 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 LRRC19Q9H756 370 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 NRDE2Q9H7Z3 1164 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 CHST7Q9NS84 486 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 TMEM30AQ9NV96 361 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 PCYOX1Q9UHG3 505 aa19.01■□□□□ 0.63
SMC4-211ENST00000469858 FNDC1Q4ZHG4 1894 aaPredicted RBP19■□□□□ 0.63
SMC4-211ENST00000469858 NLRC5Q86WI3 1866 aa19■□□□□ 0.63
SMC4-211ENST00000469858 TRUB2O95900 331 aaKnown RBP19■□□□□ 0.63
SMC4-211ENST00000469858 HSPA8P11142 646 aaKnown RBP19■□□□□ 0.63
SMC4-211ENST00000469858 DESP17661 470 aa19■□□□□ 0.63
SMC4-211ENST00000469858 FNTAP49354 379 aa19■□□□□ 0.63
SMC4-211ENST00000469858 BCAR1P56945 870 aa19■□□□□ 0.63
SMC4-211ENST00000469858 COPS2P61201 443 aa19■□□□□ 0.63
SMC4-211ENST00000469858 ADCY1Q08828 1119 aa19■□□□□ 0.63
SMC4-211ENST00000469858 TFDP3Q5H9I0 405 aa19■□□□□ 0.63
SMC4-211ENST00000469858 FAM171BQ6P995 826 aa19■□□□□ 0.63
SMC4-211ENST00000469858 DDX42Q86XP3 938 aaKnown RBP eCLIP19■□□□□ 0.63
SMC4-211ENST00000469858 DNAJC5GQ8N7S2 189 aa19■□□□□ 0.63
SMC4-211ENST00000469858 FAM172AQ8WUF8 416 aa19■□□□□ 0.63
SMC4-211ENST00000469858 FAM149B1Q96BN6 582 aa19■□□□□ 0.63
SMC4-211ENST00000469858 ARMC5Q96C12 935 aa19■□□□□ 0.63
SMC4-211ENST00000469858 TRIM31Q9BZY9 425 aa19■□□□□ 0.63
SMC4-211ENST00000469858 TMLHEQ9NVH6 421 aa19■□□□□ 0.63
SMC4-211ENST00000469858 HCSTQ9UBK5 93 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms