RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 EXOC2Q96KP1 924 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 RAD9AQ99638 391 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 SPATA5L1Q9BVQ7 753 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 TEX13BQ9BXU2 312 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 USP44Q9H0E7 712 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 ALDH8A1Q9H2A2 487 aaPredicted RBP5.6□□□□□ -1.51
VPS8-219ENST00000469479 AKIP1Q9NQ31 210 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.511e-10■■■■■ 27.8
VPS8-219ENST00000469479 ADAMTS5Q9UNA0 930 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS8-219ENST00000469479 MSRB2Q9Y3D2 182 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 Q9Y3F1 56 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
VPS8-219ENST00000469479 UMODL1Q5DID0 1318 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 TMEM221A6NGB7 291 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 M0R296 226 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 DNAJC6O75061 913 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 SNAI1O95863 264 aaPredicted RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 UBTFL1P0CB47 393 aaPredicted RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 IL9P15248 144 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 ADORA1P30542 326 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 CXCR5P32302 372 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 EXOSC9Q06265 439 aaKnown RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 TCF15Q12870 199 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 BRDTQ58F21 947 aaPredicted RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 ZC3H12BQ5HYM0 836 aaKnown RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 GDF7Q7Z4P5 450 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 BOLLQ8N9W6 283 aaKnown RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 SIMC1Q8NDZ2 872 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 GDPD5Q8WTR4 605 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 SLC9A6Q92581 669 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 FTOQ9C0B1 505 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS8-219ENST00000469479 TRPV6Q9H1D0 765 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 EPC1Q9H2F5 836 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 VCPKMTQ9H867 229 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 ACSS2Q9NR19 701 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 TRPM5Q9NZQ8 1165 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 NDOR1Q9UHB4 597 aa5.59□□□□□ -1.51
VPS8-219ENST00000469479 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
VPS8-219ENST00000469479 CACNA1GO43497 2377 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 RAD50Q92878 1312 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 ABHD14A-ACY1A0A1B0GW23 586 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 MYADML2A6NDP7 307 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 ASB14A6NK59 587 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 VWA5AO00534 786 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 MPHOSPH10O00566 681 aaKnown RBP5.58□□□□□ -1.52
VPS8-219ENST00000469479 ATP2A1O14983 1001 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 KPNA6O60684 536 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 FSBPO95073 299 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 SHMT1P34896 483 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 NBL1P41271 181 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 MCAMP43121 646 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 TIMM10P62072 90 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 FAM189BP81408 668 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 TNFAIP2Q03169 654 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 SEPT2Q15019 361 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
VPS8-219ENST00000469479 FAM214AQ32MH5 1076 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 CXCL17Q6UXB2 119 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 NOL8Q76FK4 1167 aaKnown RBP5.58□□□□□ -1.52
VPS8-219ENST00000469479 DEFB128Q7Z7B8 93 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 TLK2Q86UE8 772 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 LILRA3Q8N6C8 439 aaPredicted RBP5.58□□□□□ -1.52
VPS8-219ENST00000469479 FAM98AQ8NCA5 519 aaKnown RBP5.58□□□□□ -1.52
VPS8-219ENST00000469479 SCLYQ96I15 445 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 CCDC17Q96LX7 622 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 FSD1Q9BTV5 496 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 ENKD1Q9H0I2 346 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 TESQ9UGI8 421 aaKnown RBP5.58□□□□□ -1.52
VPS8-219ENST00000469479 SWAP70Q9UH65 585 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 PFDN2Q9UHV9 154 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 CLCA2Q9UQC9 943 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 FRMD4BQ9Y2L6 1034 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 TMX2Q9Y320 296 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 NCOR2Q9Y618 2525 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 ACACBO00763 2458 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 ATRXP46100 2492 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 FAM186AA6NE01 2351 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 SIPA1L1O43166 1804 aa5.58□□□□□ -1.52
VPS8-219ENST00000469479 PIPSLA2A3N6 862 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 PRR23AA6NEV1 266 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 H3BQ06 376 aaPredicted RBP5.57□□□□□ -1.52
VPS8-219ENST00000469479 GJB5O95377 273 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 CYP17A1P05093 508 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 APOBEC3AP31941 199 aaPredicted RBP5.57□□□□□ -1.52
VPS8-219ENST00000469479 CPT1AP50416 773 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 KIF11P52732 1056 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 WNT3AP56704 352 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 WDR5P61964 334 aaKnown RBP5.57□□□□□ -1.52
VPS8-219ENST00000469479 ICA1Q05084 483 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 SIGLEC14Q08ET2 396 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 CCDC158Q5M9N0 1113 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 PRAMEF9Q5VWM5 478 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 SNRNP48Q6IEG0 339 aaKnown RBP5.57□□□□□ -1.52
VPS8-219ENST00000469479 NFRKBQ6P4R8 1299 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 ARMCX2Q7L311 632 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 BRAPQ7Z569 592 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 CAGE1Q8TC20 777 aa5.57□□□□□ -1.52
VPS8-219ENST00000469479 AFAP1L1Q8TED9 768 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms