RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 ATP2C1P98194 919 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-217ENST00000469223 IL27RAQ6UWB1 636 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 DBX2Q6ZNG2 339 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 PHTF2Q8N3S3 785 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
HDAC6-217ENST00000469223 TUFT1Q9NNX1 390 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 TMLHEQ9NVH6 421 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
HDAC6-217ENST00000469223 PCDHB5Q9Y5E4 795 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 ITPR3Q14573 2671 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 C2CD3Q4AC94 2353 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 A0A1B0GVT2 93 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 TTC26A0AVF1 554 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 BRINP1O60477 761 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
HDAC6-217ENST00000469223 ADH5P11766 374 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 NCAM1P13591 858 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 JUPP14923 745 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 TNFSF9P41273 254 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 GRK6P43250 576 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 PEX3P56589 373 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 SAFBQ15424 915 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDAC6-217ENST00000469223 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 DDR2Q16832 855 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 ARHGAP40Q5TG30 622 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 KIAA1324Q6UXG2 1013 aaKnown RBP13.57□□□□□ -0.24
HDAC6-217ENST00000469223 MIB1Q86YT6 1006 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 IPO4Q8TEX9 1081 aaKnown RBP13.57□□□□□ -0.24
HDAC6-217ENST00000469223 LRRC15Q8TF66 581 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 FGF11Q92914 225 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 TMEM176AQ96HP8 235 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 LGMNQ99538 433 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 CPNE5Q9HCH3 593 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 GJB4Q9NTQ9 266 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 ARHGAP28Q9P2N2 729 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 FTSJ1Q9UET6 329 aa13.57□□□□□ -0.24
HDAC6-217ENST00000469223 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-217ENST00000469223 CPLX1O14810 134 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 BCAT2O15382 392 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-217ENST00000469223 ZBTB24O43167 697 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-217ENST00000469223 NEMFO60524 1076 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 ADH1CP00326 375 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 HDCP19113 662 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 RPS6KB1P23443 525 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 NTSR1P30989 418 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 C10orf76Q5T2E6 689 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 EGFLAMQ63HQ2 1017 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 ERICH1Q86X53 443 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 METTL23Q86XA0 190 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 DCP1BQ8IZD4 617 aaKnown RBP13.56□□□□□ -0.24
HDAC6-217ENST00000469223 ENGASEQ8NFI3 743 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 SPIRE2Q8WWL2 714 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 DNASE2BQ8WZ79 361 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 CD248Q9HCU0 757 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 IL17BQ9UHF5 180 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 HCN2Q9UL51 889 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 RAD54BQ9Y620 910 aa13.56□□□□□ -0.24
HDAC6-217ENST00000469223 A0A0A0MRY4 1105 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 WNT7AO00755 349 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
HDAC6-217ENST00000469223 TOM1L1O75674 476 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 TMPRSS3P57727 454 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 TARDBPQ13148 414 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■□□□ 13.5
HDAC6-217ENST00000469223 RTP5Q14D33 572 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 SUZ12Q15022 739 aaKnown RBP13.55□□□□□ -0.24
HDAC6-217ENST00000469223 PKDCCQ504Y2 493 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 DCAF12L1Q5VU92 463 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 RHBDF2Q6PJF5 856 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 THEM5Q8N1Q8 247 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 TTC9Q92623 222 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 TOE1Q96GM8 510 aaKnown RBP13.55□□□□□ -0.24
HDAC6-217ENST00000469223 NAF1Q96HR8 494 aaKnown RBP13.55□□□□□ -0.24
HDAC6-217ENST00000469223 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 ACOX2Q99424 681 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 GPR174Q9BXC1 333 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 NRSN2Q9GZP1 204 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 PLEKHA5Q9HAU0 1116 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 DSEQ9UL01 958 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-217ENST00000469223 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 PLXNA2O75051 1894 aa13.55□□□□□ -0.24
HDAC6-217ENST00000469223 LACTBL1A8MY62 500 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 CYB561D2O14569 222 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 TRIM66O15016 1216 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 CYP2F1P24903 491 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 CD6P30203 668 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 ADSSP30520 456 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC6-217ENST00000469223 CCT8P50990 548 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 EVCP57679 992 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 IL9RQ01113 521 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 NR5A1Q13285 461 aa13.54□□□□□ -0.24
HDAC6-217ENST00000469223 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms