RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ANXA11P50995 505 aaKnown RBP6.05□□□□□ -1.44
LSM5-209ENST00000468872 LOXL3P58215 753 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 C21orf58P58505 322 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 SIM1P81133 766 aaPredicted RBP6.05□□□□□ -1.44
LSM5-209ENST00000468872 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 BLMHQ13867 455 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 ARHGEF7Q14155 803 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 ZNF169Q14929 603 aaPredicted RBP6.05□□□□□ -1.44
LSM5-209ENST00000468872 PDCD2Q16342 344 aaPredicted RBP6.05□□□□□ -1.44
LSM5-209ENST00000468872 CCDC38Q502W7 563 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 PLAG1Q6DJT9 500 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 TLDC1Q6P9B6 456 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 KCTD20Q7Z5Y7 419 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 COLGALT2Q8IYK4 626 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 MYRIPQ8NFW9 859 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 MUL1Q969V5 352 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 AIFM2Q9BRQ8 373 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 DHX36Q9H2U1 1008 aaKnown RBP6.05□□□□□ -1.44
LSM5-209ENST00000468872 ZSCAN32Q9NX65 697 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 SHOC2Q9UQ13 582 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 NEU2Q9Y3R4 380 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 TNFRSF18Q9Y5U5 241 aa6.05□□□□□ -1.44
LSM5-209ENST00000468872 A0A1W2PS29 197 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 GOLGA6L3A6NEY3 463 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 E7ENX8 843 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 KCNQ3O43525 872 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 INMTO95050 263 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 CSTBP04080 98 aaKnown RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 PTDSS1P48651 473 aaKnown RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 COPAP53621 1224 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 TAP2Q03519 686 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 GEN1Q17RS7 908 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 INSCQ1MX18 579 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 TMEM95Q3KNT9 176 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 ZNF362Q5T0B9 420 aaPredicted RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 FBXO38Q6PIJ6 1188 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 LAYNQ6UX15 382 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 TMEM108Q6UXF1 575 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 USP49Q70CQ1 688 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 CLNKQ7Z7G1 428 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 MYCT1Q8N699 235 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 BOLLQ8N9W6 283 aaKnown RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 IPO4Q8TEX9 1081 aaKnown RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 DUSP26Q9BV47 211 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 OBP2BQ9NPH6 170 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 HEYLQ9NQ87 328 aaPredicted RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 TM7SF3Q9NS93 570 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 RGL1Q9NZL6 768 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 LUZP4Q9P127 313 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 IGSF9Q9P2J2 1179 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 DNMT3BQ9UBC3 853 aaKnown RBP6.04□□□□□ -1.44
LSM5-209ENST00000468872 DKK4Q9UBT3 224 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 CDY1Q9Y6F8 540 aa6.04□□□□□ -1.44
LSM5-209ENST00000468872 COL11A2P13942 1736 aaPredicted RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 PRAMEF33A0A0G2JMD5 474 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 LGALS16A8MUM7 142 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 MGST3O14880 152 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 NPC1O15118 1278 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 RRP9O43818 475 aaKnown RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 PRAMEF10O60809 474 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 SKAP2O75563 359 aaPredicted RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 SOAT2O75908 522 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 TPH1P17752 444 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 LRPAP1P30533 357 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 GRK6P43250 576 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 NDUFV1P49821 464 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 DGKEP52429 567 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 ITGA8P53708 1063 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 ELLP55199 621 aaPredicted RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 MRPS35P82673 323 aaKnown RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 KRT17Q04695 432 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 MYO1EQ12965 1108 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 DYRK1AQ13627 763 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 RAB30Q15771 203 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 PFKFB4Q16877 469 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 MGAT5BQ3V5L5 792 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 ZACNQ401N2 412 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 CD300EQ496F6 205 aaPredicted RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 CRTC1Q6UUV9 634 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 KIAA0408Q6ZU52 694 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 LNX2Q8N448 690 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 BPIFB1Q8TDL5 484 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 ZNF384Q8TF68 577 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 NELL1Q92832 810 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 SNX27Q96L92 541 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 RMDN3Q96TC7 470 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 AGO4Q9HCK5 861 aaKnown RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 ADARB2Q9NS39 739 aaKnown RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 KCTD5Q9NXV2 234 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 LRIT1Q9P2V4 623 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 MRPS17Q9Y2R5 130 aaKnown RBP6.03□□□□□ -1.44
LSM5-209ENST00000468872 PCDHGB3Q9Y5G1 929 aa6.03□□□□□ -1.44
LSM5-209ENST00000468872 hCG_1642624A0A1W2PR95 340 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 AQP12BA6NM10 295 aa6.02□□□□□ -1.45
LSM5-209ENST00000468872 ZNF37AP17032 561 aaPredicted RBP6.02□□□□□ -1.45
LSM5-209ENST00000468872 ITGALP20701 1170 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms