RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SLC7A5Q01650 507 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 CLUL1Q15846 466 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 ZFYVE27Q5T4F4 411 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 FAM171A1Q5VUB5 890 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 CCDC70Q6NSX1 233 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 CEP57Q86XR8 500 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 ZDHHC14Q8IZN3 488 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 KCTD13Q8WZ19 329 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 NDRG1Q92597 394 aaKnown RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 ACSF2Q96CM8 615 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 B3GALT6Q96L58 329 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 CNPY3Q9BT09 278 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 COLEC11Q9BWP8 271 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 PLEKHA4Q9H4M7 779 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 LRRC4Q9HBW1 653 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 CCDC188H7C350 402 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 ZMYND10O75800 440 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 RNF8O76064 485 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 OAZ2O95190 189 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 ZRANB2O95218 330 aaKnown RBP eCLIP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 OR4Q2P0C623 313 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 SLC25A11Q02978 314 aaKnown RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 CDO1Q16878 200 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 RAB6CQ53S08 254 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 LRRC38Q5VT99 294 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 SLC26A9Q7LBE3 791 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 TMCO2Q7Z6W1 182 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 TMEM173Q86WV6 379 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 RAB6CQ9H0N0 254 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 ASNSD1Q9NWL6 643 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 DMGDHQ9UI17 866 aaKnown RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 COL4A6Q14031 1691 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 CAPN15O75808 1086 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 DGKIO75912 1065 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 IL1R2P27930 398 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 VSNL1P62760 191 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 ATP11AP98196 1134 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 ADCY1Q08828 1119 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 ACAP1Q15027 740 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 SMTNL2Q2TAL5 461 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 CCDC14Q49A88 953 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 VARS2Q5ST30 1063 aaKnown RBP21.59■■□□□ 1.05
TMEM53-207ENST00000468117 GPRIN1Q7Z2K8 1008 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 EXD1Q8NHP7 514 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 RNF25Q96BH1 459 aaPredicted RBP21.59■■□□□ 1.05
TMEM53-207ENST00000468117 HERPUD2Q9BSE4 406 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 ZWILCHQ9H900 591 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 PCSK1NQ9UHG2 260 aa21.59■■□□□ 1.05
TMEM53-207ENST00000468117 TARSL2A2RTX5 802 aaKnown RBP21.58■■□□□ 1.05
TMEM53-207ENST00000468117 PI4K2BG5E9Z4 385 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 SYN3O14994 580 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 SART1O43290 800 aaKnown RBP21.58■■□□□ 1.05
TMEM53-207ENST00000468117 MIPP30301 263 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 TKTL1P51854 596 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 SMC1AQ14683 1233 aaKnown RBP21.58■■□□□ 1.05
TMEM53-207ENST00000468117 MAPRE1Q15691 268 aaKnown RBP21.58■■□□□ 1.05
TMEM53-207ENST00000468117 KCNT1Q5JUK3 1230 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 MFSD5Q6N075 450 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 ANKS1BQ7Z6G8 1248 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 SIX6OS1Q8N1H7 587 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 TMEM175Q9BSA9 504 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 RAB21Q9UL25 225 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 ALPK3Q96L96 1907 aa21.58■■□□□ 1.05
TMEM53-207ENST00000468117 GOLGA6L10A0A0M3HER8 536 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 ABHD14A-ACY1A0A1B0GW23 586 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 KRT1P04264 644 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 ACRP10323 421 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 EN2P19622 333 aaPredicted RBP21.58■■□□□ 1.04
TMEM53-207ENST00000468117 SDC4P31431 198 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 DEFB103AP81534 67 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 FAM117BQ6P1L5 589 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 FUT10Q6P4F1 479 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 TOP1MTQ969P6 601 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 CSNK1G1Q9HCP0 422 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 PATJQ8NI35 1801 aa21.58■■□□□ 1.04
TMEM53-207ENST00000468117 SF3B1O75533 1304 aaKnown RBP eCLIP21.58■■□□□ 1.04
TMEM53-207ENST00000468117 RAD51CO43502 376 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 RALAP11233 206 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 SCNN1AP37088 669 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 CLCN6P51797 869 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 MRPS5P82675 430 aaKnown RBP21.57■■□□□ 1.04
TMEM53-207ENST00000468117 HADHQ16836 314 aaKnown RBP21.57■■□□□ 1.04
TMEM53-207ENST00000468117 SLC39A12Q504Y0 691 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 POLNQ7Z5Q5 900 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 BCL7CQ8WUZ0 217 aaPredicted RBP21.57■■□□□ 1.04
TMEM53-207ENST00000468117 RAPGEF5Q92565 580 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 FAM149B1Q96BN6 582 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 HEMGNQ9BXL5 484 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 MCOLN1Q9GZU1 580 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 USP18Q9UMW8 372 aa21.57■■□□□ 1.04
TMEM53-207ENST00000468117 HHLA1C9JL84 531 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 DPYSL4O14531 572 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 FSCN2O14926 492 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 KCTD19Q17RG1 926 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 GLE1Q53GS7 698 aaKnown RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 EFHC1Q5JVL4 640 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 SPATA2LQ8IUW3 424 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 TMEM199Q8N511 208 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 PRELID2Q8N945 189 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 ULBP1Q9BZM6 244 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms