RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 GRIK1P39086 918 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 MAGEA11P43364 429 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 PDE6CP51160 858 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 CYP4F8P98187 520 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 SATB1Q01826 763 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 RUNX3Q13761 415 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 GAS6Q14393 721 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 PDGFRLQ15198 375 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 CC2D1AQ6P1N0 951 aaPredicted RBP14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 FILIP1Q7Z7B0 1213 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 GPIHBP1Q8IV16 184 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 ZC3H3Q8IXZ2 948 aaKnown RBP14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 KIAA1958Q8N8K9 716 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 CCDC150Q8NCX0 1101 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 MYCBPAPQ8TBZ2 947 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 MYLPFQ96A32 169 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 GBP4Q96PP9 640 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 DUSP9Q99956 384 aaKnown RBP14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 SDCBP2Q9H190 292 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 LMBRD1Q9NUN5 540 aa14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 ARMCX3Q9UH62 379 aaPredicted RBP14.96□□□□□ -0.01
CCHCR1-211ENST00000467553 BICDL2A1A5D9 508 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 TRDMT1O14717 391 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 GRSF1Q12849 480 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 RSPO4Q2I0M5 234 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 CCDC40Q4G0X9 1142 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 TTI2Q6NXR4 508 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 TXNDC11Q6PKC3 985 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 TMEM150AQ86TG1 271 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 MAB21L3Q8N8X9 362 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 TRIML1Q8N9V2 468 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 CCDC26Q8TAB7 109 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 PCED1BQ96HM7 432 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 CLSTN2Q9H4D0 955 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 GKN1Q9NS71 199 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 OBSL1O75147 1896 aa14.95□□□□□ -0.02
CCHCR1-211ENST00000467553 K7ESF4 209 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 TCF3P15923 654 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 SOX9P48436 509 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 MXI1P50539 228 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 MCCD1P59942 119 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 PAK1Q13153 545 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 ORC1Q13415 861 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 SIM2Q14190 667 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 PON2Q15165 354 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 FBXO43Q4G163 708 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 TMEM196Q5HYL7 178 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 VSTM1Q6UX27 236 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 ACOT1Q86TX2 421 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 WDR5BQ86VZ2 330 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 B3GALNT2Q8NCR0 500 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 FBXL13Q8NEE6 735 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 SEMA4DQ92854 862 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 USP13Q92995 863 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 ZFYVE19Q96K21 471 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 SPATA17Q96L03 361 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 CEP63Q96MT8 703 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 RTKNQ9BST9 563 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 MED10Q9BTT4 135 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 SRRTQ9BXP5 876 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 B3GNT5Q9BYG0 378 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 APOBEC3GQ9HC16 384 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 METTL14Q9HCE5 456 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 RAB20Q9NX57 234 aa14.94□□□□□ -0.02
CCHCR1-211ENST00000467553 TRAV19A0A0A6YYK7 116 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CHURC1-FNTBB4DL54 471 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 GOLGA6L22H0YM25 854 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CLDN5O00501 218 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 USP17L7P0C7H9 530 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CD58P19256 250 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 DRD1P21728 446 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 TGM1P22735 817 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 ANXA13P27216 316 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 ASPAP45381 313 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 PPP3CCP48454 512 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 NDST1P52848 882 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 NOP14P78316 857 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CBWD6Q4V339 395 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 WDR44Q5JSH3 913 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CBWD3Q5JTY5 395 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CBWD5Q5RIA9 395 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CREBRFQ8IUR6 639 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CAMKK1Q8N5S9 505 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 TNIP3Q96KP6 325 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 NUP62CLQ9H1M0 184 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 CDV3Q9UKY7 258 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 USP18Q9UMW8 372 aa14.93□□□□□ -0.02
CCHCR1-211ENST00000467553 TNK2Q07912 1038 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 NR1H3Q13133 447 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 TXNDC8Q6A555 127 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 PRR23BQ6ZRT6 265 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 CPA6Q8N4T0 437 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 OSCP1Q8WVF1 389 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 TATDN2Q93075 761 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 ATP2A3Q93084 1043 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 LOXL4Q96JB6 756 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 ZNF518BQ9C0D4 1074 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 NIF3L1Q9GZT8 377 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 CYP3A43Q9HB55 503 aa14.92□□□□□ -0.02
CCHCR1-211ENST00000467553 HPS4Q9NQG7 708 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms