RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 HHIPQ96QV1 700 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 B3GNT5Q9BYG0 378 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 RNF38Q9H0F5 515 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 SMYD3Q9H7B4 428 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 EXOC1Q9NV70 894 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 TMEM30AQ9NV96 361 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 RCOR1Q9UKL0 485 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 THADAQ6YHU6 1953 aa20.39■□□□□ 0.85
COL9A3-206ENST00000466532 LRRIQ3A6PVS8 624 aaPredicted RBP20.38■□□□□ 0.85
COL9A3-206ENST00000466532 AXIN1O15169 862 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 ACTN4O43707 911 aaKnown RBP20.38■□□□□ 0.85
COL9A3-206ENST00000466532 AP3M2P53677 418 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 CDH8P55286 799 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 SLC7A9P82251 487 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 STK4Q13043 487 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 SYT13Q7L8C5 426 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 KIAA0895Q8NCT3 520 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 PARD3BQ8TEW8 1205 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 ACDQ96AP0 544 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 PAGE5Q96GU1 130 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 SLITRK1Q96PX8 696 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 VRTNQ9H8Y1 702 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 CPQQ9Y646 472 aa20.38■□□□□ 0.85
COL9A3-206ENST00000466532 ATP8B3O60423 1300 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 FOXD2O60548 495 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-206ENST00000466532 OLFM2O95897 454 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 OAS1P00973 400 aaKnown RBP20.37■□□□□ 0.85
COL9A3-206ENST00000466532 RAP1GAPP47736 663 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 DMC1Q14565 340 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 KMT5BQ4FZB7 885 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 ZNF667Q5HYK9 610 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 SCARA5Q6ZMJ2 495 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 FILIP1Q7Z7B0 1213 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 KBTBD6Q86V97 674 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 NUP93Q8N1F7 819 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 LOXL4Q96JB6 756 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 ARRDC1-AS1Q9H2J1 176 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 SMPD4Q9NXE4 827 aa20.37■□□□□ 0.85
COL9A3-206ENST00000466532 SLC30A4O14863 429 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 GDF9O60383 454 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 AKAP3O75969 853 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 EPN2O95208 641 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 C4BPAP04003 597 aaKnown RBP20.36■□□□□ 0.85
COL9A3-206ENST00000466532 YWHAQP27348 245 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 OPRD1P41143 372 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 CLDN10P78369 228 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 NCOA4Q13772 614 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 SLC9A9Q8IVB4 645 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 ELMO3Q96BJ8 720 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 MED10Q9BTT4 135 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 DMAC2Q9NW81 257 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 NCOR2Q9Y618 2525 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 SPTBN2O15020 2390 aa20.36■□□□□ 0.85
COL9A3-206ENST00000466532 MYO18AQ92614 2054 aaKnown RBP20.35■□□□□ 0.85
COL9A3-206ENST00000466532 A0A1B0GVL5 298 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 SCAMP3O14828 347 aaKnown RBP20.35■□□□□ 0.85
COL9A3-206ENST00000466532 RTN3O95197 1032 aaPredicted RBP20.35■□□□□ 0.85
COL9A3-206ENST00000466532 APBB3O95704 486 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 CYP17A1P05093 508 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 MBL2P11226 248 aaPredicted RBP20.35■□□□□ 0.85
COL9A3-206ENST00000466532 PFKFB1P16118 471 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 CCDC6Q16204 474 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 FAM35AQ86V20 835 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 KIAA1958Q8N8K9 716 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 PDZD8Q8NEN9 1154 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 CCDC26Q8TAB7 109 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 FBXO32Q969P5 355 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 TNIP3Q96KP6 325 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 KCNK16Q96T55 309 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 KCTD10Q9H3F6 313 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 CFAP97Q9P2B7 532 aa20.35■□□□□ 0.85
COL9A3-206ENST00000466532 CEP192Q8TEP8 1941 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 PDXKO00764 312 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 SLC9A3R1O14745 358 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-206ENST00000466532 VNN1O95497 513 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 NR3C1P04150 777 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 SEC13P55735 322 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 DLG4P78352 724 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 SF3A2Q15428 464 aaKnown RBP20.34■□□□□ 0.85
COL9A3-206ENST00000466532 GAB4Q2WGN9 574 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 AASDHQ4L235 1098 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-206ENST00000466532 DDX42Q86XP3 938 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL9A3-206ENST00000466532 ADGRG2Q8IZP9 1017 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 ABCA7Q8IZY2 2146 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 ZC3H10Q96K80 434 aaKnown RBP20.34■□□□□ 0.85
COL9A3-206ENST00000466532 SDCBP2Q9H190 292 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 USP25Q9UHP3 1055 aa20.34■□□□□ 0.85
COL9A3-206ENST00000466532 K7EQS6 105 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 P4HA1P13674 534 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 CMA1P23946 247 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 DHCR24Q15392 516 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 PLK5Q496M5 336 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 C2orf27AQ580R0 203 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 PAQR9Q6ZVX9 377 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 ACOT1Q86TX2 421 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 C12orf50Q8NA57 414 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-206ENST00000466532 SCAMP5Q8TAC9 235 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 USP33Q8TEY7 942 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 TMEM174Q8WUU8 243 aa20.33■□□□□ 0.85
COL9A3-206ENST00000466532 OVCA2Q8WZ82 227 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms