RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 WNT6Q9Y6F9 365 aa13.28□□□□□ -0.28
SOX2-OT-203ENST00000466034 SPTBN2O15020 2390 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 A8MXQ7 604 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 LEFTY2O00292 366 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 OAS1P00973 400 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 C4BPAP04003 597 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 MYL1P05976 194 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 HSP90AA1P07900 732 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 HOXC13P31276 330 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 ZXDBP98169 803 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 TDRD10Q5VZ19 366 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 NAIF1Q69YI7 327 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 PRR23CQ6ZRP0 262 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 SYT13Q7L8C5 426 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 OVCA2Q8WZ82 227 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 ACDQ96AP0 544 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 DPEP3Q9H4B8 488 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 TMEM30AQ9NV96 361 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 EML5Q05BV3 1969 aa13.27□□□□□ -0.29
SOX2-OT-203ENST00000466034 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 PDXKO00764 312 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 SLC30A4O14863 429 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 RPP40O75818 363 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 RTN3O95197 1032 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 EPN2O95208 641 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 RAP1GAPP47736 663 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 CASP4P49662 377 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 TAF10Q12962 218 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 STK4Q13043 487 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 PKP1Q13835 747 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 GRAMD1CQ8IYS0 662 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 PDZD8Q8NEN9 1154 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 RPLP0P6Q8NHW5 317 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 PAGE5Q96GU1 130 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 ZC3H10Q96K80 434 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 SLITRK1Q96PX8 696 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 B3GNT5Q9BYG0 378 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 ZNF518BQ9C0D4 1074 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 LINC00597Q9H2U6 94 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 KCTD10Q9H3F6 313 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 EXOC1Q9NV70 894 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 EBF1Q9UH73 591 aa13.26□□□□□ -0.29
SOX2-OT-203ENST00000466034 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 SLC9A3R1O14745 358 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 PHACTR2O75167 634 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 VNN1O95497 513 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 CMA1P23946 247 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 OPRD1P41143 372 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 BIRC3Q13489 604 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 NCOA4Q13772 614 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 GAB4Q2WGN9 574 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 ZNF667Q5HYK9 610 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 SNX30Q5VWJ9 437 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 DDX42Q86XP3 938 aaKnown RBP eCLIP13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 TNIP3Q96KP6 325 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 DUSP9Q99956 384 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 SMYD3Q9H7B4 428 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 COMMD8Q9NX08 183 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 IL37Q9NZH6 218 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 HPSEQ9Y251 543 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 PCDHGA5Q9Y5G8 931 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 CPQQ9Y646 472 aa13.25□□□□□ -0.29
SOX2-OT-203ENST00000466034 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 FAM237AA0A1B0GTK4 181 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 FAM92AA1XBS5 289 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 CLDN5O00501 218 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 TNFRSF10BO14763 440 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 AXIN1O15169 862 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 MAPK13O15264 365 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 APBB3O95704 486 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 RPN1P04843 607 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 PFKFB1P16118 471 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 YWHAQP27348 245 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 EIF2DP41214 584 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 PXNP49023 591 aaPredicted RBP13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 LIMK1P53667 647 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 CDH8P55286 799 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 DMC1Q14565 340 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 ZACNQ401N2 412 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 PAQR9Q6ZVX9 377 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 FAM35AQ86V20 835 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 KBTBD6Q86V97 674 aa13.24□□□□□ -0.29
SOX2-OT-203ENST00000466034 ADGRG2Q8IZP9 1017 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms