RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 KIF5BP33176 963 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 EPHB1P54762 984 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 BPIFB3P59826 476 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 UBXN2AP68543 259 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 RBM6P78332 1123 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 ROR1Q01973 937 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 DSC2Q02487 901 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 SNAPC2Q13487 334 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 TUBB3Q13509 450 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 ZSCAN26Q16670 478 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 FAM153CQ494X1 144 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 TTC31Q49AM3 519 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 SPECC1Q5M775 1068 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 PPP4R3AQ6IN85 833 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 SLC30A10Q6XR72 485 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 NECAB2Q7Z6G3 386 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 SPICE1Q8N0Z3 855 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 AOPEPQ8N6M6 819 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 GABPB2Q8TAK5 448 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 NSUN6Q8TEA1 469 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 N4BP2L2Q92802 583 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 KAT5Q92993 513 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 SCAMP4Q969E2 229 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 SKA1Q96BD8 255 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 NELL2Q99435 816 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 VRK1Q99986 396 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 UTP14AQ9BVJ6 771 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 OSBPL5Q9H0X9 879 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 HOMER2Q9NSB8 354 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 TRMT1Q9NXH9 659 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 SIDT1Q9NXL6 827 aaKnown RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 ETAA1Q9NY74 926 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 CLIP2Q9UDT6 1046 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 MCM8Q9UJA3 840 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 GTF3C4Q9UKN8 822 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 BARX2Q9UMQ3 279 aaPredicted RBP3.71□□□□□ -1.82
SNX4-202ENST00000465505 GTF2A1LQ9UNN4 478 aa3.71□□□□□ -1.82
SNX4-202ENST00000465505 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.71□□□□□ -1.82
SNX4-202ENST00000465505 RNF123Q5XPI4 1314 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 CPLX1O14810 134 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 TRIAP1O43715 76 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 URI1O94763 535 aaPredicted RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 TTLL1O95922 423 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 MT-CO1P00395 513 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 NR2F6P10588 404 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 SFTPCP11686 197 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 HARSP12081 509 aaKnown RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 ATF7P17544 494 aaPredicted RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 CCNCP24863 283 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 CYP2C19P33261 490 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 RBM5P52756 815 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNX4-202ENST00000465505 COPAP53621 1224 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 KIF23Q02241 960 aaPredicted RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 BIRC3Q13489 604 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 EIF4A2Q14240 407 aaKnown RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 KRT72Q14CN4 511 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 SRSF7Q16629 238 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNX4-202ENST00000465505 KHDC1Q4VXA5 237 aaKnown RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 FAM83BQ5T0W9 1011 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 CYP26C1Q6V0L0 522 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 CCDC129Q6ZRS4 1044 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 LRRC49Q8IUZ0 686 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 C9orf106Q8NAJ2 232 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 CHMP4CQ96CF2 233 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 OSBPL9Q96SU4 736 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 BAG1Q99933 345 aaPredicted RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 ALG8Q9BVK2 526 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 SELENOOQ9BVL4 669 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 MAK16Q9BXY0 300 aaKnown RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 SMOC2Q9H3U7 446 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 PTPRHQ9HD43 1115 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 DIAPH3Q9NSV4 1193 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 SERTAD4Q9NUC0 356 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 MRPS18AQ9NVS2 196 aaKnown RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 TMOD4Q9NZQ9 345 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 C6orf203Q9P0P8 240 aaPredicted RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 LUZP4Q9P127 313 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 SERPINB13Q9UIV8 391 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 PNMA8BQ9ULN7 279 aaPredicted RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 PADI4Q9UM07 663 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 PA2G4Q9UQ80 394 aaKnown RBP3.7□□□□□ -1.82
SNX4-202ENST00000465505 ITM2BQ9Y287 266 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 ATP8A1Q9Y2Q0 1164 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 NR2E3Q9Y5X4 410 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 PEG3Q9GZU2 1588 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 AKNAQ7Z591 1439 aa3.7□□□□□ -1.82
SNX4-202ENST00000465505 BRD4O60885 1362 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 GPRASP1Q5JY77 1395 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 LINC01548A6NM66 108 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 PROB1E7EW31 1015 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 F8VZ95 297 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 FOXN3O00409 490 aaPredicted RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 KIAA0754O94854 1291 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 LATS1O95835 1130 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 RPLP2P05387 115 aaKnown RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 GJB1P08034 283 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 GYS1P13807 737 aa3.69□□□□□ -1.82
SNX4-202ENST00000465505 RPS2P15880 293 aaKnown RBP3.69□□□□□ -1.82
SNX4-202ENST00000465505 IL4RP24394 825 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms