RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PPP3CCP48454 512 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 CASP5P51878 434 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 ALCAMQ13740 583 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 BYSLQ13895 437 aaKnown RBP15.6■□□□□ 0.09
MCF2L-220ENST00000464800 LYSMD4Q5XG99 296 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 SFTPA1Q8IWL2 248 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 ADGRG2Q8IZP9 1017 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 KBTBD7Q8WVZ9 684 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 HMGB4Q8WW32 186 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 HPDLQ96IR7 371 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 EPSTI1Q96J88 318 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 TMX3Q96JJ7 454 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 CBWD1Q9BRT8 395 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 TTLL2Q9BWV7 592 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 OLFML3Q9NRN5 406 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 SMPD4Q9NXE4 827 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 CPQQ9Y646 472 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 PKD1L2Q7Z442 2459 aa15.6■□□□□ 0.09
MCF2L-220ENST00000464800 ATXN2Q99700 1313 aaKnown RBP15.6■□□□□ 0.09
MCF2L-220ENST00000464800 SPEGQ15772 3267 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 TCRBV21S2A2A0A5A6 115 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 ZNF840PA6NDX5 716 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 SCAMP3O14828 347 aaKnown RBP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 HYAL3O43820 417 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 OLFM2O95897 454 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 ABL1P00519 1130 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 TNNC2P02585 160 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 CFIP05156 583 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 CHRM1P11229 460 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 ADH5P11766 374 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 HOXD12P35452 270 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 SLC6A11P48066 632 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 NOP14P78316 857 aaKnown RBP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 KDSRQ06136 332 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 MESP2Q0VG99 397 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 SPDYCQ5MJ68 293 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 SLC23A3Q6PIS1 610 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 LIMS2Q7Z4I7 341 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 C12orf40Q86WS4 652 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 DDX42Q86XP3 938 aaKnown RBP eCLIP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 PGBD3Q8N328 593 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 GPD1LQ8N335 351 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 DNAJC19Q96DA6 116 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 PCED1BQ96HM7 432 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 RNF38Q9H0F5 515 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 PCIF1Q9H4Z3 704 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 ARHGEF4Q9NR80 690 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 TMEM74BQ9NUR3 256 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 INTS13Q9NVM9 706 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 CFAP97Q9P2B7 532 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 MBD1Q9UIS9 605 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-220ENST00000464800 SMC3Q9UQE7 1217 aa15.59■□□□□ 0.09
MCF2L-220ENST00000464800 OAS1P00973 400 aaKnown RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 HOXB3P14651 431 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 IDEP14735 1019 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 WARSP23381 471 aaKnown RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 TXLNAP40222 546 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 GRIA2P42262 883 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 KIR2DL1P43626 348 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 ATXN3P54252 364 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 SIM1P81133 766 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 MAP7D1Q3KQU3 841 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 RRAGBQ5VZM2 374 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 LARP1BQ659C4 914 aaKnown RBP15.58■□□□□ 0.08
MCF2L-220ENST00000464800 USP49Q70CQ1 688 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 SV2BQ7L1I2 683 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 FRMD1Q8N878 549 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 MYCBPAPQ8TBZ2 947 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 SLITRK1Q96PX8 696 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 MMS19Q96T76 1030 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 PILRBQ9UKJ0 227 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 MSRB2Q9Y3D2 182 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 PTPRJQ12913 1337 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 PCDH15Q96QU1 1955 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 PCNX2A6NKB5 2137 aa15.58■□□□□ 0.08
MCF2L-220ENST00000464800 MYO18AQ92614 2054 aaKnown RBP15.57■□□□□ 0.08
MCF2L-220ENST00000464800 SPAARA0A1B0GVQ0 90 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 UPK3BL1B0FP48 263 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 UPK3BL2E5RIL1 263 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 F8VP50 259 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 KIAA0391O15091 583 aaKnown RBP15.57■□□□□ 0.08
MCF2L-220ENST00000464800 AP5Z1O43299 807 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 ADAM23O75077 832 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 PDGFRBP09619 1106 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 MBL2P11226 248 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-220ENST00000464800 ITPKAP23677 461 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 TNFRSF4P43489 277 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 TAF10Q12962 218 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 MDH1BQ5I0G3 518 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 EMC10Q5UCC4 262 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 PEAR1Q5VY43 1037 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-220ENST00000464800 TDRD10Q5VZ19 366 aaKnown RBP15.57■□□□□ 0.08
MCF2L-220ENST00000464800 RHBDF2Q6PJF5 856 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 HS2ST1Q7LGA3 356 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 PIP4P1Q86T03 277 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 HDDC3Q8N4P3 179 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 OR5B17Q8NGF7 314 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 CEP76Q8TAP6 659 aa15.57■□□□□ 0.08
MCF2L-220ENST00000464800 C8orf48Q96LL4 319 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms