RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 SELENOPP49908 381 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 RAC3P60763 192 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 CD83Q01151 205 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 RNF151Q2KHN1 245 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 KCNV1Q6PIU1 500 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 DDX53Q86TM3 631 aaKnown RBP6.64□□□□□ -1.35
NUP188-202ENST00000464729 RBM23Q86U06 439 aaKnown RBP6.64□□□□□ -1.35
NUP188-202ENST00000464729 HIPK4Q8NE63 616 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 Q8TCH9 128 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 SUSD6Q92537 303 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 ZNF689Q96CS4 500 aaPredicted RBP6.64□□□□□ -1.35
NUP188-202ENST00000464729 RMDN3Q96TC7 470 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 C16orf70Q9BSU1 422 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 NAPBQ9H115 298 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 TLE6Q9H808 572 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 TMEM260Q9NX78 707 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 WDR19Q8NEZ3 1342 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 COL4A4P53420 1690 aaPredicted RBP6.64□□□□□ -1.35
NUP188-202ENST00000464729 SIP14410 1827 aa6.64□□□□□ -1.35
NUP188-202ENST00000464729 BAZ2AQ9UIF9 1905 aaKnown RBP6.64□□□□□ -1.35
NUP188-202ENST00000464729 M0R2C6 588 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 MATN3O15232 486 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 RANBP6O60518 1105 aaKnown RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 ZNF623O75123 536 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 MAFO75444 373 aaPredicted RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 KRT37O76014 449 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 ASLP04424 464 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 ITGB1P05556 798 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 TGFB3P10600 412 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 MYH8P13535 1937 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 DNAJB1P25685 340 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 HOXC8P31273 242 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 CLCN5P51795 746 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 RRADP55042 308 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 NFYCQ13952 458 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 ARHGAP44Q17R89 818 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 HSDL1Q3SXM5 330 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 CELF3Q5SZQ8 465 aaKnown RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 ARHGEF16Q5VV41 709 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 FRMPD2Q68DX3 1309 aaPredicted RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 TRIM68Q6AZZ1 485 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 TCTN3Q6NUS6 607 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 CC2D1AQ6P1N0 951 aaPredicted RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 TMEM184AQ6ZMB5 413 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 LARP4Q71RC2 724 aaKnown RBP eCLIP6.63□□□□□ -1.35
NUP188-202ENST00000464729 RASGRP2Q7LDG7 609 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 DGLUCYQ7Z3D6 616 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 ADGRD2Q7Z7M1 963 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 UBALD2Q8IYN6 164 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 TMEM105Q8N8V8 129 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 ATP8B4Q8TF62 1192 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 POF1BQ8WVV4 589 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 SPATA33Q96N06 139 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 TTC14Q96N46 770 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 CDK5RAP1Q96SZ6 601 aaKnown RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 TMEM47Q9BQJ4 181 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 GREB1LQ9C091 1923 aaPredicted RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 ECHDC1Q9NTX5 307 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 TCP11L1Q9NUJ3 509 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 SAMD15Q9P1V8 674 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 BARX2Q9UMQ3 279 aaPredicted RBP6.63□□□□□ -1.35
NUP188-202ENST00000464729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.63□□□□□ -1.35
NUP188-202ENST00000464729 TRANK1O15050 2925 aa6.63□□□□□ -1.35
NUP188-202ENST00000464729 ADGRA3Q8IWK6 1321 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 ZFHX2Q9C0A1 2572 aaPredicted RBP6.62□□□□□ -1.35
NUP188-202ENST00000464729 A0A0G2JNJ9 132 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 MED19A0JLT2 244 aaPredicted RBP6.62□□□□□ -1.35
NUP188-202ENST00000464729 FSD2A1L4K1 749 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 PER2O15055 1255 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 FOXS1O43638 330 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 CSPG5O95196 566 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 GLP2RO95838 553 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 CHRNA1P02708 482 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 SMIM10L2AP0DMW4 78 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 SMIM10L2BP0DMW5 78 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 HSPD1P10809 573 aaKnown RBP6.62□□□□□ -1.35
NUP188-202ENST00000464729 PDHBP11177 359 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 ZNF543Q08ER8 600 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 ZNF460Q14592 562 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 USH1GQ495M9 461 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 ZNF585AQ6P3V2 769 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 RTN4RL1Q86UN2 441 aaPredicted RBP6.62□□□□□ -1.35
NUP188-202ENST00000464729 CHST14Q8NCH0 376 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 WDR48Q8TAF3 677 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 FOXRED1Q96CU9 486 aaPredicted RBP6.62□□□□□ -1.35
NUP188-202ENST00000464729 RMDN1Q96DB5 314 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 NEK1Q96PY6 1258 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 S1PR5Q9H228 398 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 SEMA4AQ9H3S1 761 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 DEF6Q9H4E7 631 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 MLXIPQ9HAP2 919 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 SETD4Q9NVD3 440 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 COL20A1Q9P218 1284 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 Q9UFV3 132 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 CDC42EP3Q9UKI2 254 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 OAZ3Q9UMX2 235 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 SORCS3Q9UPU3 1222 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 TCAF1Q9Y4C2 921 aa6.62□□□□□ -1.35
NUP188-202ENST00000464729 TNPO3Q9Y5L0 923 aaKnown RBP6.62□□□□□ -1.35
NUP188-202ENST00000464729 MYO7AQ13402 2215 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms