RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 DDX42Q86XP3 938 aaKnown RBP eCLIP17.24■□□□□ 0.35
SSNA1-204ENST00000464553 ZNF687Q8N1G0 1237 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 SYNPOQ8N3V7 929 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 C12orf29Q8N999 325 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 ATOH1Q92858 354 aaPredicted RBP17.24■□□□□ 0.35
SSNA1-204ENST00000464553 TMEM176AQ96HP8 235 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 CYP2S1Q96SQ9 504 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 CISHQ9NSE2 258 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
SSNA1-204ENST00000464553 C2orf78A6NCI8 922 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 PROB1E7EW31 1015 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 H0Y858 1186 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 ZDHHC11BP0C7U3 371 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 TARSP26639 723 aaKnown RBP17.23■□□□□ 0.35
SSNA1-204ENST00000464553 RUNX3Q13761 415 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 CAMK4Q16566 473 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 TRIM59Q8IWR1 403 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 ARL14EPQ8N8R7 260 aaPredicted RBP17.23■□□□□ 0.35
SSNA1-204ENST00000464553 FBXO32Q969P5 355 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 ELMO3Q96BJ8 720 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
SSNA1-204ENST00000464553 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 SMOQ99835 787 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
SSNA1-204ENST00000464553 DUSP16Q9BY84 665 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 SEMA4AQ9H3S1 761 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 KRT82Q9NSB4 513 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 HMGXB4Q9UGU5 601 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 FBXO4Q9UKT5 387 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 CCL26Q9Y258 94 aa17.23■□□□□ 0.35
SSNA1-204ENST00000464553 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
SSNA1-204ENST00000464553 SPECC1L-ADORA2AF8WAN1 911 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 OAS1P00973 400 aaKnown RBP17.22■□□□□ 0.35
SSNA1-204ENST00000464553 CCDC130P13994 396 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 CD58P19256 250 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 CD72P21854 359 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
SSNA1-204ENST00000464553 NBL1P41271 181 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 SLC5A3P53794 718 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 USP4Q13107 963 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 NR1H3Q13133 447 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 CUL2Q13617 745 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 LRRC32Q14392 662 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 MTF1Q14872 753 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 ZNF77Q15935 545 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 ZNF528Q3MIS6 628 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 DGKKQ5KSL6 1271 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 ARHGAP17Q68EM7 881 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 ZNF276Q8N554 614 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 ZMIZ2Q8NF64 920 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 TATDN2Q93075 761 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 JAKMIP2Q96AA8 810 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 SMG9Q9H0W8 520 aaKnown RBP17.22■□□□□ 0.35
SSNA1-204ENST00000464553 CTNND2Q9UQB3 1225 aa17.22■□□□□ 0.35
SSNA1-204ENST00000464553 MTF2Q9Y483 593 aaPredicted RBP17.22■□□□□ 0.35
SSNA1-204ENST00000464553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSNA1-204ENST00000464553 SLC9A3R1O14745 358 aaPredicted RBP17.21■□□□□ 0.35
SSNA1-204ENST00000464553 LRRN2O75325 713 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 CTHP32929 405 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 PSEN1P49768 467 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 RAD23BP54727 409 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 MAP3K7CLP57077 242 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 SLC8A3P57103 927 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 KCNH2Q12809 1159 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 HECTD3Q5T447 861 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 CLEC20AQ6ZU45 233 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 SCAMP5Q8TAC9 235 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 SH3RF2Q8TEC5 729 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 NT5C1BQ96P26 610 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 CHRDQ9H2X0 955 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 TLR8Q9NR97 1041 aaKnown RBP17.21■□□□□ 0.35
SSNA1-204ENST00000464553 FAM49BQ9NUQ9 324 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 DUS2Q9NX74 493 aaKnown RBP17.21■□□□□ 0.35
SSNA1-204ENST00000464553 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 SCML2Q9UQR0 700 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 PTPRDP23468 1912 aa17.21■□□□□ 0.35
SSNA1-204ENST00000464553 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 LAMTOR5O43504 91 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 CHRNB1P11230 501 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
SSNA1-204ENST00000464553 GCNT1Q02742 428 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 PPP2R5DQ14738 602 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 CPA6Q8N4T0 437 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 ANKRD52Q8NB46 1076 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 SLC4A11Q8NBS3 891 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 EHBP1Q8NDI1 1231 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 LMO3Q8TAP4 145 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 ZFYVE19Q96K21 471 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 FAM81BQ96LP2 452 aa17.2■□□□□ 0.34
SSNA1-204ENST00000464553 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
SSNA1-204ENST00000464553 FAM126AQ9BYI3 521 aaPredicted RBP17.2■□□□□ 0.34
SSNA1-204ENST00000464553 RNF38Q9H0F5 515 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms