RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 SPTLC1O15269 473 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 TRUB2O95900 331 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 CHN1P15882 459 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 CREB1P16220 341 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 LMNB2Q03252 620 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 C9orf57Q5W0N0 161 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 SLC35B2Q8TB61 432 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 CFAP57Q96MR6 1250 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 ZNF143P52747 638 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 BEST2Q8NFU1 509 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 ZNF296Q8WUU4 475 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 NKD2Q969F2 451 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 DRG1Q9Y295 367 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 SCN10AQ9Y5Y9 1956 aa20.65■□□□□ 0.9
POLR2J3-203ENST00000464525 SMIM28A0A1B0GU29 152 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 C2CD4BA6NLJ0 364 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 DNALI1O14645 258 aaPredicted RBP20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 TRIM66O15016 1216 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 TRAPPC3O43617 180 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 KPNA6O60684 536 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 GNAT1P11488 350 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 PECAM1P16284 738 aaPredicted RBP20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 LMO2P25791 158 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 HOXC8P31273 242 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 MMP13P45452 471 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 FASTKD3Q14CZ7 662 aaKnown RBP20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 CYP4V2Q6ZWL3 525 aaPredicted RBP20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 WNT8BQ93098 351 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 GTF2IRD1Q9UHL9 959 aa20.64■□□□□ 0.9
POLR2J3-203ENST00000464525 GOLGA8MH3BSY2 632 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 AGTP01019 485 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 FGFR1P11362 822 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 GPD1P21695 349 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 GAD2Q05329 585 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 SOX4Q06945 474 aaPredicted RBP20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 RFX6Q8HWS3 928 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 ARRDC4Q8NCT1 418 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 CMASQ8NFW8 434 aaPredicted RBP20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 MIS12Q9H081 205 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 ASNSD1Q9NWL6 643 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 CNTN3Q9P232 1028 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 TBK1Q9UHD2 729 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 KIAA1257Q9ULG3 409 aa20.64■□□□□ 0.89
POLR2J3-203ENST00000464525 GMNCA6NCL1 334 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 ITGAVP06756 1048 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 IGFBP6P24592 240 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 MTM1Q13496 603 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 QPCTQ16769 361 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 PKDCCQ504Y2 493 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 UBXN11Q5T124 520 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 NPNTQ6UXI9 565 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 BBS12Q6ZW61 710 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 EXOC3L1Q86VI1 746 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 ZCCHC9Q8N567 271 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 BBOF1Q8ND07 529 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 SAYSD1Q9NPB0 183 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 GPATCH2LQ9NWQ4 482 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 DERAQ9Y315 318 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 A8MXQ7 604 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 BANF1O75531 89 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CTSHP09668 335 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CHRM1P11229 460 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CCDC130P13994 396 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 MAGEA4P43358 317 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 TNFAIP8L3Q5GJ75 292 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 SCYL2Q6P3W7 929 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CAPN12Q6ZSI9 719 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CYP4X1Q8N118 509 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CLEC4CQ8WTT0 213 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 KHSRPQ92945 711 aaKnown RBP eCLIP20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 CNPY3Q9BT09 278 aa20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 TPX2Q9ULW0 747 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-203ENST00000464525 MYO1CO00159 1063 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 FAM107AO95990 144 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 CDC42EP1Q00587 391 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 TAZQ16635 292 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 CCDC142Q17RM4 750 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 CCDC14Q49A88 953 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 UNC45BQ8IWX7 931 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 KLHDC9Q8NEP7 349 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 TSPYL1Q9H0U9 437 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 TFE3P19532 575 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 ADORA2BP29275 332 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 CDH6P55285 790 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 MAP3K21Q5TCX8 1036 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 OLFML1Q6UWY5 402 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 APBB1IPQ7Z5R6 666 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 SLC35F5Q8WV83 523 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 KBTBD7Q8WVZ9 684 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 ROPN1BQ9BZX4 212 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 ROPN1Q9HAT0 212 aaPredicted RBP20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 CACNG4Q9UBN1 327 aa20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 DDX20Q9UHI6 824 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-203ENST00000464525 PAPSS1O43252 624 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-203ENST00000464525 FBXO47Q5MNV8 452 aa20.61■□□□□ 0.89
POLR2J3-203ENST00000464525 CCSAPQ6IQ19 270 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-203ENST00000464525 MFSD5Q6N075 450 aa20.61■□□□□ 0.89
POLR2J3-203ENST00000464525 CNOT10Q9H9A5 744 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms