RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SH2B2O14492 632 aaPredicted RBP4.15□□□□□ -1.74
SCFD1-204ENST00000463622 PRC1O43663 620 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 ORC4O43929 436 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 HNRNPLP14866 589 aaKnown RBP eCLIP4.15□□□□□ -1.743e-7■■□□□ 12.7
SCFD1-204ENST00000463622 RFC2P35250 354 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 BPIFB4P59827 614 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 ERVK-21P61565 698 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 BEX3Q00994 111 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 TFAP4Q01664 338 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 GPNMBQ14956 572 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 DGKDQ16760 1214 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 IMMTQ16891 758 aaKnown RBP4.15□□□□□ -1.74
SCFD1-204ENST00000463622 TKFCQ3LXA3 575 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 LSM12Q3MHD2 195 aaKnown RBP4.15□□□□□ -1.74
SCFD1-204ENST00000463622 MIIPQ5JXC2 388 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 GAREM2Q75VX8 874 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 BMP8AQ7Z5Y6 402 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 NEK9Q8TD19 979 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 ANKS1AQ92625 1134 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 GCDHQ92947 438 aaPredicted RBP4.15□□□□□ -1.74
SCFD1-204ENST00000463622 E2F7Q96AV8 911 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 NEK1Q96PY6 1258 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 TEX13BQ9BXU2 312 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 NACAP1Q9BZK3 213 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 PCED1AQ9H1Q7 454 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 ALDH8A1Q9H2A2 487 aaPredicted RBP4.15□□□□□ -1.74
SCFD1-204ENST00000463622 NELFAQ9H3P2 528 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 POFUT1Q9H488 388 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 SH2D4AQ9H788 454 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 LY9Q9HBG7 655 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 TOMM22Q9NS69 142 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 OXSMQ9NWU1 459 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 TNKSO95271 1327 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 PTPRZ1P23471 2315 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 GOLGA8BA8MQT2 603 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 ZNF891A8MT65 544 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 MPHOSPH10O00566 681 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CYR61O00622 381 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 EPB41L2O43491 1005 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 RANBP6O60518 1105 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 H2AFYO75367 372 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CYP17A1P05093 508 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 IQCF3P0C7M6 154 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 SUPT20HL2P0C7V6 817 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 EEF2P13639 858 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 IL9P15248 144 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 NEK4P51957 841 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 ANAPC15P60006 121 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 TNFAIP2Q03169 654 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 FSCN1Q16658 493 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 ME3Q16798 604 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 IQSEC1Q6DN90 963 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CNNM4Q6P4Q7 775 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 BLOC1S2Q6QNY1 142 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 USP51Q70EK9 711 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 ARMCX2Q7L311 632 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 ENAHQ8N8S7 591 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 NECAB1Q8N987 351 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 FAM133AQ8N9E0 248 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 NKD2Q969F2 451 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CEP95Q96GE4 821 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 DYDC2Q96IM9 177 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 AGXT2Q9BYV1 514 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 TM6SF1Q9BZW5 370 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CPVLQ9H3G5 476 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 ALG13Q9NP73 1137 aaKnown RBP4.15□□□□□ -1.75
SCFD1-204ENST00000463622 SWAP70Q9UH65 585 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CTNNA3Q9UI47 895 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 VWA7Q9Y334 891 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 FRMPD3Q5JV73 1810 aa4.15□□□□□ -1.75
SCFD1-204ENST00000463622 CACNA1AO00555 2505 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-204ENST00000463622 UBE2QL1A1L167 161 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 LCHNA4D1U4 455 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 ZEB2O60315 1214 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 BAIAP3O94812 1187 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 CTDNEP1O95476 244 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 CYP2C9P11712 490 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 ACTN1P12814 892 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 KCNA5P22460 613 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 ACRV1P26436 265 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 FLT3P36888 993 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 NOVP48745 357 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 HHEXQ03014 270 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 ICA1Q05084 483 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 STK3Q13188 491 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 HERC4Q5GLZ8 1057 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-204ENST00000463622 TAPT1Q6NXT6 567 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 MFSD6Q6ZSS7 791 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 PRPF38AQ8NAV1 312 aaKnown RBP4.14□□□□□ -1.75
SCFD1-204ENST00000463622 PRSS33Q8NF86 280 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 NCOA7Q8NI08 942 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 RABGGTAQ92696 567 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 SLC6A15Q9H2J7 730 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 PDRG1Q9NUG6 133 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 TRMT13Q9NUP7 481 aaKnown RBP4.14□□□□□ -1.75
SCFD1-204ENST00000463622 KCMF1Q9P0J7 381 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 NCDNQ9UBB6 729 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 PLIN4Q96Q06 1357 aa4.14□□□□□ -1.75
SCFD1-204ENST00000463622 PLXNA1Q9UIW2 1896 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms