RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TAB2Q9NYJ8 693 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 APEX2Q9UBZ4 518 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 LIMA1Q9UHB6 759 aaKnown RBP18.72■□□□□ 0.59
VPS52-214ENST00000463486 ZMYM5Q9UJ78 669 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 KIAA1257Q9ULG3 409 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 CCL26Q9Y258 94 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 PCDHB4Q9Y5E5 795 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 SYCE3A1L190 88 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 HEPACAM2A8MVW5 462 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 BECN2A8MW95 431 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 ARNTLO00327 626 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 RTN3O95197 1032 aaPredicted RBP18.71■□□□□ 0.59
VPS52-214ENST00000463486 VDRP11473 427 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 PTMSP20962 102 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 FCHO2Q0JRZ9 810 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 SNX30Q5VWJ9 437 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 HFE2Q6ZVN8 426 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 RBBP8NLQ8NC74 664 aaPredicted RBP18.71■□□□□ 0.59
VPS52-214ENST00000463486 MRPS31Q92665 395 aaKnown RBP18.71■□□□□ 0.59
VPS52-214ENST00000463486 USP13Q92995 863 aaPredicted RBP18.71■□□□□ 0.59
VPS52-214ENST00000463486 OBP2AQ9NY56 170 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 EHD2Q9NZN4 543 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 WNT16Q9UBV4 365 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 PATJQ8NI35 1801 aa18.71■□□□□ 0.59
VPS52-214ENST00000463486 NUP210Q8TEM1 1887 aaPredicted RBP18.71■□□□□ 0.59
VPS52-214ENST00000463486 PRR33A8MZF0 331 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 TULP2O00295 520 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 LETM1O95202 739 aaPredicted RBP18.7■□□□□ 0.58
VPS52-214ENST00000463486 OLFM2O95897 454 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 PDGFBP01127 241 aaPredicted RBP18.7■□□□□ 0.58
VPS52-214ENST00000463486 TRIM21P19474 475 aaKnown RBP18.7■□□□□ 0.58
VPS52-214ENST00000463486 PPP3CCP48454 512 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 KIF11P52732 1056 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 ZXDBP98169 803 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 GRM2Q14416 872 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 IQCB1Q15051 598 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 TMEM31Q5JXX7 168 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 LCLAT1Q6UWP7 414 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 ENOSF1Q7L5Y1 443 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 AOPEPQ8N6M6 819 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 OVCA2Q8WZ82 227 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 SHC3Q92529 594 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 E2F7Q96AV8 911 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 NAA15Q9BXJ9 866 aaKnown RBP18.7■□□□□ 0.58
VPS52-214ENST00000463486 DNAI2Q9GZS0 605 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 RNF38Q9H0F5 515 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 TRPM5Q9NZQ8 1165 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 CHORDC1Q9UHD1 332 aaPredicted RBP18.7■□□□□ 0.58
VPS52-214ENST00000463486 TSPAN16Q9UKR8 245 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 USP3Q9Y6I4 520 aa18.7■□□□□ 0.58
VPS52-214ENST00000463486 KRBA1A5PL33 1030 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 SHISA7A6NL88 538 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 GABBR2O75899 941 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 OAS1P00973 400 aaKnown RBP18.69■□□□□ 0.58
VPS52-214ENST00000463486 CFHP08603 1231 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 ATP1A3P13637 1013 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 PSMC3P17980 439 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 ZNF268Q14587 947 aaPredicted RBP18.69■□□□□ 0.58
VPS52-214ENST00000463486 CNGA2Q16280 664 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 GOLGA7BQ2TAP0 167 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 SGO2Q562F6 1265 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 RAB41Q5JT25 222 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 SMYD5Q6GMV2 418 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
VPS52-214ENST00000463486 VPS16Q9H269 839 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 ACP6Q9NPH0 428 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 SCML2Q9UQR0 700 aa18.69■□□□□ 0.58
VPS52-214ENST00000463486 F5P12259 2224 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 CD19P15391 556 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 COPB1P53618 953 aaKnown RBP18.68■□□□□ 0.58
VPS52-214ENST00000463486 MFAP3P55082 362 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 PDE4CQ08493 712 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 SKOR2Q2VWA4 1001 aaPredicted RBP18.68■□□□□ 0.58
VPS52-214ENST00000463486 KLHDC7AQ5VTJ3 777 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 PIGZQ86VD9 579 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 CELF5Q8N6W0 485 aaKnown RBP18.68■□□□□ 0.58
VPS52-214ENST00000463486 DEPDC1BQ8WUY9 529 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 FBXO32Q969P5 355 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 FAM81BQ96LP2 452 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 SLITRK1Q96PX8 696 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 TRMT61BQ9BVS5 477 aaKnown RBP18.68■□□□□ 0.58
VPS52-214ENST00000463486 TDP1Q9NUW8 608 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 OSER1Q9NX31 292 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 GMIPQ9P107 970 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 DNAJC12Q9UKB3 198 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.68■□□□□ 0.58
VPS52-214ENST00000463486 COL4A2P08572 1712 aa18.68■□□□□ 0.58
VPS52-214ENST00000463486 ZNF318Q5VUA4 2279 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 COL4A3Q01955 1670 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 PFKLP17858 780 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 HDCP19113 662 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 BRD2P25440 801 aaKnown RBP18.67■□□□□ 0.58
VPS52-214ENST00000463486 AVPR1AP37288 418 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 ZNF165P49910 485 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 IFRD2Q12894 506 aaPredicted RBP18.67■□□□□ 0.58
VPS52-214ENST00000463486 ZSCAN23Q3MJ62 389 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 SCD5Q86SK9 330 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 PDZD8Q8NEN9 1154 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 UBA3Q8TBC4 463 aa18.67■□□□□ 0.58
VPS52-214ENST00000463486 SLC35F5Q8WV83 523 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms