RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, human

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL4A-205	ENST00000463426	CDR2	Q01850	454 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	PDE4C	Q08493	712 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	ASIC2	Q16515	512 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	PPP1R2P3	Q6NXS1	205 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	PIGZ	Q86VD9	579 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	LRRC3	Q9BY71	257 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	NR2E1	Q9Y466	385 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	ANAPC1	Q9H1A4	1944 aa		27.56	■■■□□ 2
CUL4A-205	ENST00000463426	HHLA1	C9JL84	531 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	BEST1	O76090	585 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	PFKL	P17858	780 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	PRKCI	P41743	596 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	PTPN21	Q16825	1174 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	TSR1	Q2NL82	804 aa	Known RBP	27.55	■■■□□ 2
CUL4A-205	ENST00000463426	RAB41	Q5JT25	222 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	OTOP3	Q7RTS5	596 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	SCML4	Q8N228	414 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	TMEM35B	Q8NCS4	154 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	MSANTD4	Q8NCY6	345 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	PHF7	Q9BWX1	381 aa	Predicted RBP	27.55	■■■□□ 2
CUL4A-205	ENST00000463426	MIS12	Q9H081	205 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	LRRC4	Q9HBW1	653 aa		27.55	■■■□□ 2
CUL4A-205	ENST00000463426	NOCT	Q9UK39	431 aa	Known RBP	27.55	■■■□□ 2
CUL4A-205	ENST00000463426	MRPS23	Q9Y3D9	190 aa	Known RBP	27.55	■■■□□ 2
CUL4A-205	ENST00000463426	AP5Z1	O43299	807 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	CDH5	P33151	784 aa	Predicted RBP	27.54	■■■□□ 2
CUL4A-205	ENST00000463426	GPD2	P43304	727 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	CDR1	P51861	262 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	KIF11	P52732	1056 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	ARHGAP15	Q53QZ3	475 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	PRSS36	Q5K4E3	855 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	SDHAF4	Q5VUM1	108 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	NOP9	Q86U38	636 aa	Known RBP	27.54	■■■□□ 2
CUL4A-205	ENST00000463426	CNGA4	Q8IV77	575 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	DDX1	Q92499	740 aa	Known RBP	27.54	■■■□□ 2
CUL4A-205	ENST00000463426	SECISBP2L	Q93073	1101 aa	Known RBP	27.54	■■■□□ 2
CUL4A-205	ENST00000463426	ACSF2	Q96CM8	615 aa	Predicted RBP	27.54	■■■□□ 2
CUL4A-205	ENST00000463426	POMK	Q9H5K3	350 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	HCFC1R1	Q9NWW0	138 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	GDE1	Q9NZC3	331 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	MAGED2	Q9UNF1	606 aa	Predicted RBP	27.54	■■■□□ 2
CUL4A-205	ENST00000463426	SCML2	Q9UQR0	700 aa		27.54	■■■□□ 2
CUL4A-205	ENST00000463426	SART1	O43290	800 aa	Known RBP	27.53	■■■□□ 2
CUL4A-205	ENST00000463426	FBXO21	O94952	628 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	MYL4	P12829	197 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	GABRR2	P28476	465 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	CDC25B	P30305	580 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	RPL34	P49207	117 aa	Known RBP	27.53	■■■□□ 2
CUL4A-205	ENST00000463426	PSEN1	P49768	467 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	TFF2	Q03403	129 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	CCDC186	Q7Z3E2	898 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	IRF2BP2	Q7Z5L9	587 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	DRC7	Q8IY82	874 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	ARHGAP18	Q8N392	663 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	UBA3	Q8TBC4	463 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	GPR152	Q8TDT2	470 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	MRPS31	Q92665	395 aa	Known RBP	27.53	■■■□□ 2
CUL4A-205	ENST00000463426	IL21	Q9HBE4	155 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	ACP6	Q9NPH0	428 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	CNGB3	Q9NQW8	809 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	PRDM6	Q9NQX0	595 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	TRPM5	Q9NZQ8	1165 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	USP3	Q9Y6I4	520 aa		27.53	■■■□□ 2
CUL4A-205	ENST00000463426	GOLGA6L3	A6NEY3	463 aa		27.52	■■■□□ 2
CUL4A-205	ENST00000463426	HNRNPH3	P31942	346 aa	Known RBP	27.52	■■■□□ 2
CUL4A-205	ENST00000463426	CASP14	P31944	242 aa		27.52	■■■□□ 2
CUL4A-205	ENST00000463426	ARID5B	Q14865	1188 aa		27.52	■■■□□ 2
CUL4A-205	ENST00000463426	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	27.52	■■■□□ 2
CUL4A-205	ENST00000463426	SIX6OS1	Q8N1H7	587 aa		27.52	■■■□□ 2
CUL4A-205	ENST00000463426	FBXO32	Q969P5	355 aa		27.52	■■■□□ 2
CUL4A-205	ENST00000463426	NUP210	Q8TEM1	1887 aa	Predicted RBP	27.52	■■■□□ 2
CUL4A-205	ENST00000463426	F11	P03951	625 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	ARID5A	Q03989	594 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	KLHL30	Q0D2K2	578 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	MTMR3	Q13615	1198 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	DENND1B	Q6P3S1	775 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	TMC6	Q7Z403	805 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	VPS36	Q86VN1	386 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	HS6ST3	Q8IZP7	471 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	PLCD3	Q8N3E9	789 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	STKLD1	Q8NE28	680 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	OR8K1	Q8NGG5	319 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	ASB2	Q96Q27	587 aa		27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	ZNF334	Q9HCZ1	680 aa	Predicted RBP	27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	TLR8	Q9NR97	1041 aa	Known RBP	27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	ZNHIT6	Q9NWK9	470 aa	Known RBP	27.51	■■□□□ 1.99
CUL4A-205	ENST00000463426	TBX2	Q13207	712 aa	Predicted RBP	27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	SNX30	Q5VWJ9	437 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	GAREM2	Q75VX8	874 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	MON1A	Q86VX9	555 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	IPO4	Q8TEX9	1081 aa	Known RBP	27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	CPLX3	Q8WVH0	158 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	IRGQ	Q8WZA9	623 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	DNAJC7	Q99615	494 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	AGPAT1	Q99943	283 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	TRIM62	Q9BVG3	475 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	SLC4A5	Q9BY07	1137 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	ATXN3L	Q9H3M9	355 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	CDH7	Q9ULB5	785 aa		27.5	■■□□□ 1.99
CUL4A-205	ENST00000463426	GOLGA6L6	A8MZA4	724 aa		27.49	■■□□□ 1.99

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