RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 PMS2CLQ68D20 193 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 LPCAT2Q7L5N7 544 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 TRAPPC11Q7Z392 1133 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 DDX42Q86XP3 938 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL4A2-204ENST00000463084 TXNDC5Q8NBS9 432 aaKnown RBP13.9□□□□□ -0.18
COL4A2-204ENST00000463084 GLIS3Q8NEA6 775 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 MDGA1Q8NFP4 955 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 CXorf38Q8TB03 319 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 RLN3Q8WXF3 142 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 FBXO32Q969P5 355 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 DHX58Q96C10 678 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 CNOT6LQ96LI5 555 aaKnown RBP13.9□□□□□ -0.18
COL4A2-204ENST00000463084 USP28Q96RU2 1077 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 PNKPQ96T60 521 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 ZDHHC4Q9NPG8 344 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 ARHGEF4Q9NR80 690 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 SH3BP1Q9Y3L3 701 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 CHD8Q9HCK8 2581 aa13.9□□□□□ -0.18
COL4A2-204ENST00000463084 ATP8B3O60423 1300 aa13.9□□□□□ -0.19
COL4A2-204ENST00000463084 MAP1BP46821 2468 aaKnown RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 A0A087X0B3 334 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ZNF840PA6NDX5 716 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 K7EQS6 105 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 TM4SF5O14894 197 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 GIPC1O14908 333 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 CLIC2O15247 247 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ZBTB24O43167 697 aaPredicted RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 KAT7O95251 611 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 IRF1P10914 325 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ADH5P11766 374 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 PFKLP17858 780 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 PTPN1P18031 435 aaKnown RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 SYT1P21579 422 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 SLC6A11P48066 632 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 PPP3CCP48454 512 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ATXN3P54252 364 aaPredicted RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 MRPS21P82921 87 aaKnown RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 DHCR24Q15392 516 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 CRY1Q16526 586 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 SNRNP35Q16560 246 aaKnown RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 EOGTQ5NDL2 527 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 WHAMMQ8TF30 809 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 C8orf48Q96LL4 319 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 CGRRF1Q99675 332 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 NUSAP1Q9BXS6 441 aaKnown RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ELOVL4Q9GZR5 314 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
COL4A2-204ENST00000463084 ATXN2Q99700 1313 aaKnown RBP13.89□□□□□ -0.19
COL4A2-204ENST00000463084 CNOT1A5YKK6 2376 aaKnown RBP13.88□□□□□ -0.19
COL4A2-204ENST00000463084 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TCRBV21S2A2A0A5A6 115 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TBC1D3BA6NDS4 549 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 ANTXRLA6NF34 631 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.88□□□□□ -0.19
COL4A2-204ENST00000463084 CLDN5O00501 218 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 CFIP05156 583 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TCF3P15923 654 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 SPINK2P20155 84 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 YWHAQP27348 245 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 SLC7A9P82251 487 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 ANO4Q32M45 955 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TRIM61Q5EBN2 209 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 FAM26FQ5R3K3 315 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 CEP295NLQ96MC4 621 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 RNF38Q9H0F5 515 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 DPEP3Q9H4B8 488 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 TBC1D14Q9P2M4 693 aa13.88□□□□□ -0.19
COL4A2-204ENST00000463084 EIF3DO15371 548 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 GRIA2P42262 883 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 MYL6P60660 151 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 IRX4P78413 519 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 SHC2P98077 582 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 ZXDBP98169 803 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 LMAN2Q12907 356 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 BYSLQ13895 437 aaKnown RBP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 LY6G5CQ5SRR4 150 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 EMC10Q5UCC4 262 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 KIAA1211LQ6NV74 962 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 NUDT18Q6ZVK8 323 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 SFTPA1Q8IWL2 248 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 NUP93Q8N1F7 819 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 B3GALNT2Q8NCR0 500 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 ERLEC1Q96DZ1 483 aa13.87□□□□□ -0.19
COL4A2-204ENST00000463084 INTS4Q96HW7 963 aaKnown RBP13.87□□□□□ -0.19
COL4A2-204ENST00000463084 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms