RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 ERLEC1Q96DZ1 483 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 FUBP3Q96I24 572 aaKnown RBP eCLIP16.76■□□□□ 0.27
SND1-203ENST00000463020 SPATA17Q96L03 361 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 ACCSQ96QU6 501 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 MRPL45Q9BRJ2 306 aaKnown RBP16.76■□□□□ 0.27
SND1-203ENST00000463020 MYOFQ9NZM1 2061 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 GCNT3O95395 438 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 OLFM2O95897 454 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 ENGP17813 658 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 ITPKAP23677 461 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 LHX1P48742 406 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 SLC7A9P82251 487 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 RBP5P82980 135 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 NR1H3Q13133 447 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 POSTNQ15063 836 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 PIP4P1Q86T03 277 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 HMGB4Q8WW32 186 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 ZCCHC14Q8WYQ9 949 aaKnown RBP16.75■□□□□ 0.27
SND1-203ENST00000463020 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 PCED1BQ96HM7 432 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 TTLL2Q9BWV7 592 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 CFAP97Q9P2B7 532 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 MAGEC2Q9UBF1 373 aaPredicted RBP16.75■□□□□ 0.27
SND1-203ENST00000463020 EVLQ9UI08 416 aaPredicted RBP16.75■□□□□ 0.27
SND1-203ENST00000463020 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
SND1-203ENST00000463020 GON4LQ3T8J9 2241 aa16.75■□□□□ 0.27
SND1-203ENST00000463020 F8VP50 259 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 TAF4O00268 1085 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 TRIM24O15164 1050 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 PRPF6O94906 941 aaKnown RBP16.74■□□□□ 0.27
SND1-203ENST00000463020 KAT7O95251 611 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 OAS1P00973 400 aaKnown RBP16.74■□□□□ 0.27
SND1-203ENST00000463020 GARTP22102 1010 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 PCSK1P29120 753 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 ABCD1P33897 745 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 HOXD13P35453 343 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 GRIK1P39086 918 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 CYP27A1Q02318 531 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 RING1Q06587 406 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 MDH1BQ5I0G3 518 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 DENND5BQ6ZUT9 1274 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 MIB1Q86YT6 1006 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 CBWD2Q8IUF1 395 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 EXOC4Q96A65 974 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 HPDLQ96IR7 371 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 ZFRQ96KR1 1074 aaKnown RBP16.74■□□□□ 0.27
SND1-203ENST00000463020 INTS13Q9NVM9 706 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 ADAMTS9Q9P2N4 1935 aa16.74■□□□□ 0.27
SND1-203ENST00000463020 PCDH15Q96QU1 1955 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 TCRBV21S2A2A0A5A6 115 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 CLDN5O00501 218 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 TNFRSF10BO14763 440 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 WARSP23381 471 aaKnown RBP16.73■□□□□ 0.27
SND1-203ENST00000463020 MRPS21P82921 87 aaKnown RBP16.73■□□□□ 0.27
SND1-203ENST00000463020 TAF10Q12962 218 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 FAM173BQ6P4H8 233 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 LPCAT2Q7L5N7 544 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 C11orf74Q86VG3 221 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
SND1-203ENST00000463020 PNKPQ96T60 521 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 ZNF518BQ9C0D4 1074 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 CD93Q9NPY3 652 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 TRPM5Q9NZQ8 1165 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 PILRBQ9UKJ0 227 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 CDH9Q9ULB4 789 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 KIF3AQ9Y496 699 aa16.73■□□□□ 0.27
SND1-203ENST00000463020 FRMD3A2A2Y4 597 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 ABL1P00519 1130 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 HSP90AA1P07900 732 aaKnown RBP16.72■□□□□ 0.27
SND1-203ENST00000463020 TMEM191BP0C7N4 346 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 PGFP49763 221 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 IFRD2Q12894 506 aaPredicted RBP16.72■□□□□ 0.27
SND1-203ENST00000463020 RESTQ13127 1097 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 SEMA3BQ13214 749 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 LY6G5CQ5SRR4 150 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 PEAR1Q5VY43 1037 aaPredicted RBP16.72■□□□□ 0.27
SND1-203ENST00000463020 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 SYT12Q8IV01 421 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 NAT16Q8N8M0 369 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 SPATA18Q8TC71 538 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 ELMO3Q96BJ8 720 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
SND1-203ENST00000463020 ARHGEF4Q9NR80 690 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 OLFML3Q9NRN5 406 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 SEL1LQ9UBV2 794 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 EXOC7Q9UPT5 735 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 PLXND1Q9Y4D7 1925 aa16.72■□□□□ 0.27
SND1-203ENST00000463020 A0A0A0MRY4 1105 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
SND1-203ENST00000463020 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
SND1-203ENST00000463020 CAPNS1P04632 268 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 ADH5P11766 374 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 IDEP14735 1019 aa16.71■□□□□ 0.27
SND1-203ENST00000463020 GAP43P17677 238 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms