RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 AP4E1Q9UPM8 1137 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 VPS9D1Q9Y2B5 631 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 BRAFP15056 766 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 EPHB3P54753 998 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
RBM39-223ENST00000463004 C10orf120Q5SQS8 335 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 ERMARDQ5T6L9 678 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 CRLF3Q8IUI8 442 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 PPM1NQ8N819 430 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 VAT1Q99536 393 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 OSGEPQ9NPF4 335 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
RBM39-223ENST00000463004 SHOC2Q9UQ13 582 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 DUSP10Q9Y6W6 482 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 DFFAO00273 331 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 UPP2O95045 317 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 CHEK2O96017 543 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 EPHB2P29323 1055 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 MAGEA4P43358 317 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 STX1BP61266 288 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 PABPC3Q9H361 631 aaKnown RBP12.25□□□□□ -0.45
RBM39-223ENST00000463004 TXLNGQ9NUQ3 528 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 ZC3H7BQ9UGR2 993 aaKnown RBP12.25□□□□□ -0.45
RBM39-223ENST00000463004 ADAM21Q9UKJ8 722 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 RAB21Q9UL25 225 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 ANGPTL3Q9Y5C1 460 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 C4BPAP04003 597 aaKnown RBP12.25□□□□□ -0.45
RBM39-223ENST00000463004 NFICP08651 508 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 RAG1P15918 1043 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 SMPD1P17405 629 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 CCR1P32246 355 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 NOS2P35228 1153 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 ZNF792Q3KQV3 632 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 PDZD8Q8NEN9 1154 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 TRIM51Q9BSJ1 452 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 RASSF4Q9H2L5 321 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 FAM105AQ9NUU6 356 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 TMEM39AQ9NV64 488 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 ZFATQ9P243 1243 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 TBK1Q9UHD2 729 aa12.25□□□□□ -0.45
RBM39-223ENST00000463004 CHD4Q14839 1912 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 GRAP2O75791 330 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 C22orf31O95567 290 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 PTPN1P18031 435 aaKnown RBP12.24□□□□□ -0.45
RBM39-223ENST00000463004 AKAP5P24588 427 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 IFNAR2P48551 515 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 GEMIN4P57678 1058 aaKnown RBP12.24□□□□□ -0.45
RBM39-223ENST00000463004 MAGOHP61326 146 aaKnown RBP12.24□□□□□ -0.45
RBM39-223ENST00000463004 ARHGAP1Q07960 439 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 EEF1DP3Q658K8 133 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 GAD1Q99259 594 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 TRIM55Q9BYV6 548 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 ST3GAL5Q9UNP4 418 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 OR6C75A6NL08 312 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 POLBP06746 335 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 APRTP07741 180 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 H2AFXP16104 143 aaPredicted RBP12.24□□□□□ -0.45
RBM39-223ENST00000463004 GRK4P32298 578 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 HSPA9P38646 679 aaKnown RBP12.24□□□□□ -0.45
RBM39-223ENST00000463004 RAP1GAPP47736 663 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 VCPP55072 806 aaKnown RBP12.24□□□□□ -0.45
RBM39-223ENST00000463004 PTK7Q13308 1070 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 PDCLQ13371 301 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 ITGA7Q13683 1181 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 NOMO2Q5JPE7 1267 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 LRRC49Q8IUZ0 686 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 EFR3BQ9Y2G0 817 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 TISP43B9A030 160 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 TTC4O95801 387 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 SAT1P21673 171 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 EDNRBP24530 442 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 ITGA8P53708 1063 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 FMO1Q01740 532 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 PRAMEF19Q5SWL8 479 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 FBXL18Q96ME1 805 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 YME1L1Q96TA2 773 aa12.24□□□□□ -0.45
RBM39-223ENST00000463004 SF3B1O75533 1304 aaKnown RBP eCLIP12.24□□□□□ -0.459e-7■■□□□ 13.4
RBM39-223ENST00000463004 F5H5T6 163 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 PCK1P35558 622 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 NOMO3P69849 1222 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 MBTD1Q05BQ5 628 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 CCDC15Q0P6D6 951 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 TUSC3Q13454 348 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 BSNDQ8WZ55 320 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 VCXQ9H320 206 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 POPDC2Q9HBU9 364 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 FGFR1OP2Q9NVK5 253 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 TRHDEQ9UKU6 1024 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 LAMB2P55268 1798 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 PGK1P00558 417 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 PPM1AP35813 382 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 HERC6Q8IVU3 1022 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 FNIP1Q8TF40 1166 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 DDX20Q9UHI6 824 aaKnown RBP12.23□□□□□ -0.45
RBM39-223ENST00000463004 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 RAD54BQ9Y620 910 aa12.23□□□□□ -0.45
RBM39-223ENST00000463004 CASTOR2A6NHX0 329 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms