RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 ZDHHC7Q9NXF8 308 aa8.41□□□□□ -1.06
ERCC8-204ENST00000462279 SMCHD1A6NHR9 2005 aa8.41□□□□□ -1.06
ERCC8-204ENST00000462279 CROCCQ5TZA2 2017 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 TCRBV9S1A1TA0A576 114 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 TMEM150BA6NC51 233 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 KBTBD13C9JR72 458 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 H0YIN7 160 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 PEX1O43933 1283 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 LYPLA1O75608 230 aaPredicted RBP8.4□□□□□ -1.06
ERCC8-204ENST00000462279 VIL1P09327 827 aaKnown RBP8.4□□□□□ -1.06
ERCC8-204ENST00000462279 TFPTP0C1Z6 253 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 DSG3P32926 999 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 PSMD7P51665 324 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 COPAP53621 1224 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 PEX3P56589 373 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 PSMC5P62195 406 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 C6orf52Q5T4I8 152 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 CES4AQ5XG92 561 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 CIAPIN1Q6FI81 312 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 ARL10Q8N8L6 244 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 DCUN1D1Q96GG9 259 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 SLITRK1Q96PX8 696 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 ACCSQ96QU6 501 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 WDR83Q9BRX9 315 aaKnown RBP8.4□□□□□ -1.06
ERCC8-204ENST00000462279 KIFC3Q9BVG8 833 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 CCDC106Q9BWC9 280 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 NYXQ9GZU5 481 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 GPRC5CQ9NQ84 441 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 POMPQ9Y244 141 aa8.4□□□□□ -1.06
ERCC8-204ENST00000462279 A0A1B0GTW7 788 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 F8VP50 259 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 IPO5O00410 1097 aaKnown RBP8.4□□□□□ -1.07
ERCC8-204ENST00000462279 P4HA2O15460 535 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 TMEM63AO94886 807 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 STAMBPO95630 424 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 WEE2P0C1S8 567 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 DHRS4L1P0CG22 281 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 UNGP13051 313 aaPredicted RBP8.4□□□□□ -1.07
ERCC8-204ENST00000462279 VARSP26640 1264 aaKnown RBP8.4□□□□□ -1.07
ERCC8-204ENST00000462279 HSPA1LP34931 641 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 CPOXP36551 454 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 SREBF1P36956 1147 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 STT3AP46977 705 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 EMP3P54852 163 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 NAA20P61599 178 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 MAMLD1Q13495 774 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 LPIN1Q14693 890 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 PPP6R3Q5H9R7 873 aaPredicted RBP8.4□□□□□ -1.07
ERCC8-204ENST00000462279 HAUS6Q7Z4H7 955 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 POLNQ7Z5Q5 900 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 PPIL6Q8IXY8 311 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 SETDB2Q96T68 719 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 WDR18Q9BV38 432 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 Q9H521 79 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 XPNPEP1Q9NQW7 623 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 CDH22Q9UJ99 828 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 DMTF1Q9Y222 760 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 AP4B1Q9Y6B7 739 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 NAV1Q8NEY1 1877 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 SPATA31A5Q5VU36 1347 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 SPATA31A6Q5VVP1 1343 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 SPATA31A7Q8IWB4 1347 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.07
ERCC8-204ENST00000462279 TRIM43BA6NCK2 446 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TBC1D12O60347 775 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 FOXD2O60548 495 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 CIITAP33076 1130 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 MLH1P40692 756 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 SMAD1Q15797 465 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 DCUN1D2Q6PH85 259 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 MOXD1Q6UVY6 613 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 KYAT3Q6YP21 454 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 NCCRP1Q6ZVX7 275 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 LARGE2Q8N3Y3 721 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TRIML2Q8N7C3 387 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 ACTL9Q8TC94 416 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 LRGUKQ96M69 825 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 PCDH9Q9HC56 1237 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 ANLNQ9NQW6 1124 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 BARX2Q9UMQ3 279 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 APOBEC2Q9Y235 224 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 TNRC6CQ9HCJ0 1690 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 ZNFX1Q9P2E3 1918 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 DNAJA2O60884 412 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 SERPINA6P08185 405 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 OTUD4Q01804 1114 aaKnown RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 PDE1CQ14123 709 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-204ENST00000462279 SPOPLQ6IQ16 392 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 SPOCD1Q6ZMY3 1216 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 SV2AQ7L0J3 742 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 RCOR2Q8IZ40 523 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 RNF148Q8N7C7 305 aa8.39□□□□□ -1.07
ERCC8-204ENST00000462279 FAM71DQ8N9W8 422 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms