RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 NT5C1AQ9BXI3 368 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 CHRDQ9H2X0 955 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 SEMA4AQ9H3S1 761 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 FAM124BQ9H5Z6 455 aaPredicted RBP9.36□□□□□ -0.91
SYN3-207ENST00000462268 METTL14Q9HCE5 456 aaKnown RBP9.36□□□□□ -0.91
SYN3-207ENST00000462268 KRT82Q9NSB4 513 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 COMMD8Q9NX08 183 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 RAB20Q9NX57 234 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 GTSE1Q9NYZ3 720 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 CHMP5Q9NZZ3 219 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 MAN1B1Q9UKM7 699 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 ARHGAP26Q9UNA1 814 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 CCL26Q9Y258 94 aa9.36□□□□□ -0.91
SYN3-207ENST00000462268 MYO10Q9HD67 2058 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 BICDL2A1A5D9 508 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 C2orf78A6NCI8 922 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 ZNF840PA6NDX5 716 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 FAM200BP0CF97 657 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 SP9P0CG40 484 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 HDCP19113 662 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 YWHAQP27348 245 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 SOX9P48436 509 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 IFNAR2P48551 515 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 CCR3P51677 355 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 SLC5A3P53794 718 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 USP46P62068 366 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 UBE2HP62256 183 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 TNK2Q07912 1038 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 IFRD2Q12894 506 aaPredicted RBP9.35□□□□□ -0.91
SYN3-207ENST00000462268 TAF10Q12962 218 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 RUNX3Q13761 415 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 ZNF528Q3MIS6 628 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 DGKKQ5KSL6 1271 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 ANKRD40Q6AI12 368 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 FOXR2Q6PJQ5 311 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 FRMD5Q7Z6J6 570 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
SYN3-207ENST00000462268 FUKQ8N0W3 1084 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 CPA6Q8N4T0 437 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 KIAA1958Q8N8K9 716 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 SLC2A14Q8TDB8 520 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 SH3RF2Q8TEC5 729 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 OSCP1Q8WVF1 389 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 ATP2A3Q93084 1043 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 FBXO32Q969P5 355 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
SYN3-207ENST00000462268 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 CEP63Q96MT8 703 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 FAM83CQ9BQN1 747 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 FBXO44Q9H4M3 255 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 APOBEC3GQ9HC16 384 aaKnown RBP9.35□□□□□ -0.91
SYN3-207ENST00000462268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.35□□□□□ -0.91
SYN3-207ENST00000462268 PRMT8Q9NR22 394 aaPredicted RBP9.35□□□□□ -0.91
SYN3-207ENST00000462268 GKN1Q9NS71 199 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 GCNT4Q9P109 453 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
SYN3-207ENST00000462268 ARMCX3Q9UH62 379 aaPredicted RBP9.35□□□□□ -0.91
SYN3-207ENST00000462268 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 PRR23AA6NEV1 266 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CILPO75339 1184 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 OLFM2O95897 454 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 ABL1P00519 1130 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
SYN3-207ENST00000462268 CHRNB1P11230 501 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CCDC130P13994 396 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CD58P19256 250 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TUBP50607 506 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
SYN3-207ENST00000462268 SLC7A9P82251 487 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CETN1Q12798 172 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 GRSF1Q12849 480 aaKnown RBP eCLIP9.34□□□□□ -0.91
SYN3-207ENST00000462268 MTAPQ13126 283 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 ORC1Q13415 861 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 FZD5Q13467 585 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CCDC40Q4G0X9 1142 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TRIM68Q6AZZ1 485 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 PAQR9Q6ZVX9 377 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 SYNPOQ8N3V7 929 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TRIML1Q8N9V2 468 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TTC16Q8NEE8 873 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TTC8Q8TAM2 541 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 SLC22A12Q96S37 553 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CYP2S1Q96SQ9 504 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 KCNK16Q96T55 309 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 HNRNPABQ99729 332 aaKnown RBP9.34□□□□□ -0.91
SYN3-207ENST00000462268 FAM126AQ9BYI3 521 aaPredicted RBP9.34□□□□□ -0.91
SYN3-207ENST00000462268 EBF3Q9H4W6 596 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 CSNK1G1Q9HCP0 422 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 HPS4Q9NQG7 708 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 FAM49BQ9NUQ9 324 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 TMEM30AQ9NV96 361 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 DUS2Q9NX74 493 aaKnown RBP9.34□□□□□ -0.91
SYN3-207ENST00000462268 PCDHGA2Q9Y5H1 932 aa9.34□□□□□ -0.91
SYN3-207ENST00000462268 DOCK6Q96HP0 2047 aa9.33□□□□□ -0.92
SYN3-207ENST00000462268 FAM92AA1XBS5 289 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms