RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 IL23AQ9NPF7 189 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 DMRT3Q9NQL9 472 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 TLR9Q9NR96 1032 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 ING3Q9NXR8 418 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.75□□□□□ -1.49
COPS3-204ENST00000462236 TRPS1Q9UHF7 1281 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 SERPINB13Q9UIV8 391 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 LIMCH1Q9UPQ0 1083 aa5.75□□□□□ -1.49
COPS3-204ENST00000462236 CACNA1GO43497 2377 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 ZFHX2Q9C0A1 2572 aaPredicted RBP5.74□□□□□ -1.49
COPS3-204ENST00000462236 EPG5Q9HCE0 2579 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 EP300Q09472 2414 aaPredicted RBP5.74□□□□□ -1.49
COPS3-204ENST00000462236 CCDC154A6NI56 674 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 KBTBD13C9JR72 458 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 PLATP00750 562 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 ADORA1P30542 326 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 ZEB1P37275 1124 aaPredicted RBP5.74□□□□□ -1.49
COPS3-204ENST00000462236 NPEPPSP55786 919 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 CDC42EP1Q00587 391 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 MECOMQ03112 1051 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 FPGSQ05932 587 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 FAM47AQ5JRC9 791 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 IFIT1BQ5T764 474 aaKnown RBP5.74□□□□□ -1.49
COPS3-204ENST00000462236 LILRA6Q6PI73 481 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 EPM2AIP1Q7L775 607 aaPredicted RBP5.74□□□□□ -1.49
COPS3-204ENST00000462236 ADGRE4PQ86SQ3 457 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 WDR63Q8IWG1 891 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 ZDHHC14Q8IZN3 488 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 SYT8Q8NBV8 401 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 SHCBP1Q8NEM2 672 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 TTC8Q8TAM2 541 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 SLC35G2Q8TBE7 412 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 SNX27Q96L92 541 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 PAGR1Q9BTK6 254 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 ZCCHC4Q9H5U6 513 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 GNL3LQ9NVN8 582 aaKnown RBP5.74□□□□□ -1.49
COPS3-204ENST00000462236 TMOD4Q9NZQ9 345 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 PI4KBQ9UBF8 816 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 TBX21Q9UL17 535 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 SPTBN2O15020 2390 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 CEP250Q9BV73 2442 aa5.74□□□□□ -1.49
COPS3-204ENST00000462236 KMT2EQ8IZD2 1858 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 GRXCR1A8MXD5 290 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 TEX33O43247 280 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 STRNO43815 780 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 ITGA10O75578 1167 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 ARIH2O95376 493 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 TIMP1P01033 207 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 ADSLP30566 484 aaPredicted RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 SREBF1P36956 1147 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 GZMKP49863 264 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 CDK7P50613 346 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 PER3P56645 1201 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 CCNA1P78396 465 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 SP140Q13342 867 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 RIN1Q13671 783 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 SEPT2Q15019 361 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 SPTY2D1Q68D10 685 aaPredicted RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 CCSAPQ6IQ19 270 aaPredicted RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 SLC4A10Q6U841 1118 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 B3GNT9Q6UX72 402 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 DZIP1Q86YF9 867 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 FOXP4Q8IVH2 680 aaPredicted RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 PQLC1Q8N2U9 271 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 LILRA3Q8N6C8 439 aaPredicted RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 NSUN6Q8TEA1 469 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 MVB12AQ96EY5 273 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 RPL10LQ96L21 214 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 GTPBP4Q9BZE4 634 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 MEGF9Q9H1U4 602 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 DHX36Q9H2U1 1008 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 C12orf65Q9H3J6 166 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 LANCL2Q9NS86 450 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 C1orf112Q9NSG2 853 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 CALCOCO1Q9P1Z2 691 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 NRBP1Q9UHY1 535 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 RCAN3Q9UKA8 241 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 NOB1Q9ULX3 412 aaKnown RBP5.73□□□□□ -1.49
COPS3-204ENST00000462236 POLHQ9Y253 713 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 PLXNA3P51805 1871 aa5.73□□□□□ -1.49
COPS3-204ENST00000462236 MYH7BA7E2Y1 1941 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 CDC14BO60729 498 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 ADORA2AP29274 412 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 GUCY1A2P33402 732 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 SLC6A9P48067 706 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 TFF2Q03403 129 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 MRPL49Q13405 166 aaKnown RBP5.72□□□□□ -1.49
COPS3-204ENST00000462236 RAB39AQ14964 217 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 PGS1Q32NB8 556 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 TMEM31Q5JXX7 168 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 ANO1Q5XXA6 986 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 MFSD5Q6N075 450 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 TATDN1Q6P1N9 297 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 ZNF572Q7Z3I7 529 aaPredicted RBP5.72□□□□□ -1.49
COPS3-204ENST00000462236 WDR75Q8IWA0 830 aaKnown RBP5.72□□□□□ -1.49
COPS3-204ENST00000462236 DRC7Q8IY82 874 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 ABRAQ8N0Z2 381 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 KLHDC9Q8NEP7 349 aa5.72□□□□□ -1.49
COPS3-204ENST00000462236 OR2I1PQ8NGU4 316 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms