RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GRIK1P39086 918 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 KIR2DL1P43626 348 aaPredicted RBP11.6□□□□□ -0.55
CBX3-205ENST00000462165 MAPK8P45983 427 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 SLC6A11P48066 632 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 PPP3CCP48454 512 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 USP46P62068 366 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 RBP5P82980 135 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 GRIN1Q05586 938 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 KCNA1Q09470 495 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 MESP2Q0VG99 397 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 BYSLQ13895 437 aaKnown RBP11.6□□□□□ -0.55
CBX3-205ENST00000462165 SOWAHAQ2M3V2 549 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 MAP7D1Q3KQU3 841 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 EOGTQ5NDL2 527 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 L1TD1Q5T7N2 865 aaKnown RBP11.6□□□□□ -0.55
CBX3-205ENST00000462165 LYSMD4Q5XG99 296 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 ARMCX6Q7L4S7 300 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 SFTPA1Q8IWL2 248 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 FRMD1Q8N878 549 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 RASSF8Q8NHQ8 419 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 KBTBD7Q8WVZ9 684 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 SAAL1Q96ER3 474 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 SYT15Q9BQS2 421 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 TTLL2Q9BWV7 592 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 RNF38Q9H0F5 515 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 EHD2Q9NZN4 543 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 BCCIPQ9P287 314 aaKnown RBP eCLIP11.6□□□□□ -0.55
CBX3-205ENST00000462165 SEL1LQ9UBV2 794 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 SIX4Q9UIU6 781 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 PILRBQ9UKJ0 227 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 KLK13Q9UKR3 277 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 CDH9Q9ULB4 789 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 EXOC7Q9UPT5 735 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 CACNA1EQ15878 2313 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 ADAMTS20P59510 1910 aa11.6□□□□□ -0.55
CBX3-205ENST00000462165 FASNP49327 2511 aaKnown RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 ZNF840PA6NDX5 716 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 H3BQV1 296 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 ADAM23O75077 832 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 BMP15O95972 392 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 KRT19P08727 400 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 TMEM191BP0C7N4 346 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 LMO2P25791 158 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 TNFRSF4P43489 277 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 PSMC1P62191 440 aaKnown RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 NOP14P78316 857 aaKnown RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 SIM1P81133 766 aaPredicted RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 RESTQ13127 1097 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 MAPRE1Q15691 268 aaKnown RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 RHBDF2Q6PJF5 856 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 DYMQ7RTS9 669 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 C12orf40Q86WS4 652 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 CEP76Q8TAP6 659 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 MYLPFQ96A32 169 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 FAM84AQ96KN4 292 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 ACCSQ96QU6 501 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 MRPL44Q9H9J2 332 aaKnown RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 ARHGEF4Q9NR80 690 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
CBX3-205ENST00000462165 SLC6A14Q9UN76 642 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 CPQQ9Y646 472 aa11.59□□□□□ -0.55
CBX3-205ENST00000462165 ANKRD11Q6UB99 2663 aaPredicted RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 SPAARA0A1B0GVQ0 90 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 TRIM66O15016 1216 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 AP5Z1O43299 807 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 ADH1CP00326 375 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 OAS1P00973 400 aaKnown RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 GAP43P17677 238 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 ITPKAP23677 461 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 ANXA13P27216 316 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 GJB2P29033 226 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 RDXP35241 583 aaKnown RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 GRIA2P42262 883 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 ATXN3P54252 364 aaPredicted RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 MYO1EQ12965 1108 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 DDX42Q86XP3 938 aaKnown RBP eCLIP11.58□□□□□ -0.56
CBX3-205ENST00000462165 PHTF2Q8N3S3 785 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 HDDC3Q8N4P3 179 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 HMGB4Q8WW32 186 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 DNAJC19Q96DA6 116 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 PCED1BQ96HM7 432 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 ANKRD36BP1Q96IX9 119 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 MTMR12Q9C0I1 747 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 PDE11AQ9HCR9 933 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 CRTAC1Q9NQ79 661 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 OLFML3Q9NRN5 406 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
CBX3-205ENST00000462165 ATXN2Q99700 1313 aaKnown RBP11.58□□□□□ -0.56
CBX3-205ENST00000462165 TCRBV21S2A2A0A5A6 115 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 GOLGA8IPA6NC78 632 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 GOLGA8JA6NMD2 632 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 F8VP50 259 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 TAF4O00268 1085 aa11.57□□□□□ -0.56
CBX3-205ENST00000462165 OPHN1O60890 802 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms